RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CUL3Q13618 768 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 CRTC3Q6UUV7 619 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 TRAPPC5Q8IUR0 188 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 PARP9Q8IXQ6 854 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 OR9I1Q8NGQ6 314 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 OR2T3Q8NH03 318 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 GABRG3Q99928 467 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 OSBPL6Q9BZF3 934 aa19.27■□□□□ 0.67
SSH1-209ENST00000551165 ADH1BP00325 375 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 ANXA5P08758 320 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 EPORP19235 508 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 CD72P21854 359 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 PGM1P36871 562 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 PLA2G4EQ3MJ16 856 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 SYTL3Q4VX76 610 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.26■□□□□ 0.67
SSH1-209ENST00000551165 ZNF776Q68DI1 518 aaPredicted RBP19.26■□□□□ 0.67
SSH1-209ENST00000551165 DOK6Q6PKX4 331 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 GK5Q6ZS86 529 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 ATP6V1E2Q96A05 226 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 MCUR1Q96AQ8 359 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 TUBGCP3Q96CW5 907 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 THTPAQ9BU02 230 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 TRIM39Q9HCM9 518 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 CD93Q9NPY3 652 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 FBXL12Q9NXK8 326 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 OPTCQ9UBM4 332 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 SHISA7A6NL88 538 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 KPNA5O15131 536 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 TM7SF2O76062 418 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 MATN4O95460 622 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 C8GP07360 202 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 NME5P56597 212 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 PNCKQ6P2M8 343 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 HEATR4Q86WZ0 1026 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 RASGRP3Q8IV61 690 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 SUGP1Q8IWZ8 645 aaKnown RBP19.26■□□□□ 0.67
SSH1-209ENST00000551165 EFCAB3Q8N7B9 438 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 GANCQ8TET4 914 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 DENND2DQ9H6A0 471 aaPredicted RBP19.26■□□□□ 0.67
SSH1-209ENST00000551165 BAIAP2L1Q9UHR4 511 aa19.26■□□□□ 0.67
SSH1-209ENST00000551165 ZFC3H1O60293 1989 aaKnown RBP19.25■□□□□ 0.67
SSH1-209ENST00000551165 ARHGEF33A8MVX0 844 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 K7EPI3 171 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 AIM2O14862 343 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 PEX11AO75192 247 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 ATP6V1G2O95670 118 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 PAK4O96013 591 aaPredicted RBP19.25■□□□□ 0.67
SSH1-209ENST00000551165 HOXB2P14652 356 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 ITGAXP20702 1163 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 HNRNPH1P31943 449 aaKnown RBP19.25■□□□□ 0.67
SSH1-209ENST00000551165 CFAP206Q8IYR0 622 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 METTL6Q8TCB7 284 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 UBTD2Q8WUN7 234 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 TMEM159Q96B96 161 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 ATG10Q9H0Y0 220 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 CD248Q9HCU0 757 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 GIPC1O14908 333 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 STK16O75716 305 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 SORBS2O94875 1100 aaKnown RBP19.25■□□□□ 0.67
SSH1-209ENST00000551165 HGFP14210 728 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 BDKRB1P46663 353 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 PKNOX1P55347 436 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 KIRREL3Q8IZU9 778 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 HIC2Q96JB3 615 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 C1orf21Q9H246 121 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 RNF11Q9Y3C5 154 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 OR1A2Q9Y585 309 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 ANGPTL3Q9Y5C1 460 aa19.25■□□□□ 0.67
SSH1-209ENST00000551165 LOC730098B7Z3J9 87 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 QSOX1O00391 747 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 FFAR3O14843 346 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 NPC1O15118 1278 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 GPR42O15529 346 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 MBTPS2O43462 519 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 AP1G1O43747 822 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 PRDX6P30041 224 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 CCNG1P51959 295 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 PTCHD3Q3KNS1 767 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 XKR7Q5GH72 579 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 PAOXQ6QHF9 649 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 MILR1Q7Z6M3 343 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 WDR60Q8WVS4 1066 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 RCN3Q96D15 328 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 COX14Q96I36 57 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 CCDC167Q9P0B6 97 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 COLQQ9Y215 455 aaPredicted RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 HIST1H2AGP0C0S8 130 aaPredicted RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 THRAP10827 490 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 HIST1H2ADP20671 130 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 NAA20P61599 178 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 CYLC2Q14093 348 aaPredicted RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 INPP5AQ14642 412 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 BCL7AQ4VC05 210 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 NEK5Q6P3R8 708 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 Q6ZSR9 355 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 NEK10Q6ZWH5 1172 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 RALGPS2Q86X27 583 aaPredicted RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 OR14C36Q8NHC7 312 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms