RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 INTS10Q9NVR2 710 aaKnown RBP13.4□□□□□ -0.26
TROAP-213ENST00000550709 GALPQ9UBC7 116 aa13.4□□□□□ -0.26
TROAP-213ENST00000550709 SLC24A2Q9UI40 661 aa13.4□□□□□ -0.26
TROAP-213ENST00000550709 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
TROAP-213ENST00000550709 ACACBO00763 2458 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 CCDC187A0A096LP49 1063 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 E5RI56 91 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 H3BMM5 538 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 BRINP1O60477 761 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 ACADLP28330 430 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 NDUFS1P28331 727 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 CCKBRP32239 447 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 LIMK2P53671 638 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 PLOD1Q02809 727 aaPredicted RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 CAV1Q03135 178 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 C16orf72Q14CZ0 275 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 WDR74Q6RFH5 385 aaPredicted RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 PLXDC1Q8IUK5 500 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 PALM2Q8IXS6 379 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 LMNTD2Q8IXW0 634 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 OR4E2Q8NGC2 313 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 LCN9Q8WX39 176 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 GRAMD1AQ96CP6 724 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 DPYSL5Q9BPU6 564 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 EPB41L1Q9H4G0 881 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 XKR8Q9H6D3 395 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 MVB12BQ9H7P6 319 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 DMGDHQ9UI17 866 aaKnown RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
TROAP-213ENST00000550709 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 PLXNB3Q9ULL4 1909 aa13.39□□□□□ -0.27
TROAP-213ENST00000550709 AKAP13Q12802 2813 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 OR6C74A6NCV1 312 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 PLD2O14939 933 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 CAPN5O15484 640 aaPredicted RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 GPC4O75487 556 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 THRAP10827 490 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 CAPZBP47756 277 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 LEPRP48357 1165 aaKnown RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 LSSP48449 732 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 PPP1CAP62136 330 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 RTP5Q14D33 572 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 ZNF549Q6P9A3 640 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 FAM92BQ6ZTR7 304 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 SLC22A15Q8IZD6 547 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 CEP112Q8N8E3 955 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 C2CD4AQ8NCU7 369 aaPredicted RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 ACVR1CQ8NER5 493 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 OR52E1Q8NGJ3 308 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 ZCCHC14Q8WYQ9 949 aaKnown RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 NDNQ99608 321 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 CMKLR1Q99788 373 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 AKAP7Q9P0M2 348 aaPredicted RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 PISDQ9UG56 409 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 RUVBL2Q9Y230 463 aaKnown RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 FREM2Q5SZK8 3169 aa13.38□□□□□ -0.27
TROAP-213ENST00000550709 ZNF106Q9H2Y7 1883 aaKnown RBP13.38□□□□□ -0.27
TROAP-213ENST00000550709 KPNA5O15131 536 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 KIF1CO43896 1103 aaKnown RBP13.37□□□□□ -0.27
TROAP-213ENST00000550709 RASSF9O75901 435 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 PIAS1O75925 651 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 SLCO2B1O94956 709 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 TNFSF15O95150 251 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 AHSGP02765 367 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 JMJD7P0C870 316 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 CCL4P13236 92 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
TROAP-213ENST00000550709 ITIH1P19827 911 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 GABRB3P28472 473 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 RBMS1P29558 406 aaKnown RBP13.37□□□□□ -0.27
TROAP-213ENST00000550709 SSTR1P30872 391 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 CSTF2P33240 577 aaKnown RBP eCLIP13.37□□□□□ -0.27
TROAP-213ENST00000550709 MGAT5Q09328 741 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 ARMC6Q6NXE6 501 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 FAM129CQ86XR2 697 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 ZBTB2Q8N680 514 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 SIDT2Q8NBJ9 832 aaKnown RBP13.37□□□□□ -0.27
TROAP-213ENST00000550709 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 ZDHHC12Q96GR4 267 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 SLC30A3Q99726 388 aa13.37□□□□□ -0.27
TROAP-213ENST00000550709 TRIT1Q9H3H1 467 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms