RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CALCOCO2Q13137 446 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 CUL1Q13616 776 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 LAMB3Q13751 1172 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 IHHQ14623 411 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 KCNJ11Q14654 390 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PDCD1Q15116 288 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 UGP2Q16851 508 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF528Q3MIS6 628 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ARMC12Q5T9G4 340 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 RNASEH2BQ5TBB1 312 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ERAP2Q6P179 960 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NEK5Q6P3R8 708 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PPP1R21Q6ZMI0 780 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 USP45Q70EL2 814 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ERN2Q76MJ5 926 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 CAMK1DQ8IU85 385 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MMAAQ8IVH4 418 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF366Q8N895 744 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 GLIS1Q8NBF1 620 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NOA1Q8NC60 698 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 CLRN3Q8NCR9 226 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MCUQ8NE86 351 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 OR6K2Q8NGY2 324 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SPATA22Q8NHS9 363 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SIPA1Q96FS4 1042 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SCRN2Q96FV2 425 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 KLHL32Q96NJ5 620 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 LYSMD1Q96S90 227 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MLPHQ9BV36 600 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ENKD1Q9H0I2 346 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 TSPYL1Q9H0U9 437 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 TRABDQ9H4I3 376 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MAGEE1Q9HCI5 957 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ZDHHC4Q9NPG8 344 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ITM2CQ9NQX7 267 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 HACD3Q9P035 362 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SARDHQ9UL12 918 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PHTF1Q9UMS5 762 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NCKAP1Q9Y2A7 1128 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MYOFQ9NZM1 2061 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MIA3Q5JRA6 1907 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MUC3AQ02505 3323 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 A0A0J9YYE9 177 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MAGEB16A2A368 324 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 RGSL1A5PLK6 1076 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ANTXRLA6NF34 631 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CAPN8A6NHC0 703 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ANKRD66B4E2M5 251 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 K7ESF4 209 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 DNALI1O14645 258 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 AREL1O15033 823 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MID1O15344 667 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TSPAN6O43657 245 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 GJB3O75712 270 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 RNASEH2AO75792 299 aaKnown RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PIGNO95427 931 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MT-CYBP00156 380 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TRBC1P01850 177 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 LPLP06858 475 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TUBBP07437 444 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ATXN1LP0C7T5 689 aaKnown RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TDGF1P13385 188 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ADRB3P13945 408 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ETS1P14921 441 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 DRD3P35462 400 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NUDT1P36639 197 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MMP12P39900 470 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MAGEA3P43357 314 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PSMD8P48556 350 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MASP1P48740 699 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NPY2RP49146 381 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 LMAN1P49257 510 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 MAN2A2P49641 1150 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TPMTP51580 245 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 EPHB1P54762 984 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NRG3P56975 720 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 BASP1P80723 227 aaKnown RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PDE1BQ01064 536 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ELP6Q0PNE2 266 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CNTN1Q12860 1018 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CDH17Q12864 832 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TRIP13Q15645 432 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 SLC1A5Q15758 541 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 FAM214AQ32MH5 1076 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 CT83Q5H943 113 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 SIRPB2Q5JXA9 342 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PIP5KL1Q5T9C9 394 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 IZUMO3Q5VZ72 239 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 ANO7Q6IWH7 933 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 HIBCHQ6NVY1 386 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 KIAA1324Q6UXG2 1013 aaKnown RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 DPPA4Q7L190 304 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 PARS2Q7L3T8 475 aaKnown RBP5.72□□□□□ -1.49
SCAF11-213ENST00000550629 NLRP9Q7RTR0 991 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 TTC7BQ86TV6 843 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 IFT20Q8IY31 132 aa5.72□□□□□ -1.49
SCAF11-213ENST00000550629 AADATQ8N5Z0 425 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms