RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 MRI1Q9BV20 369 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 CINPQ9BW66 212 aaPredicted RBP6.45□□□□□ -1.38
UBE2N-204ENST00000549833 RSPH9Q9H1X1 276 aaPredicted RBP6.45□□□□□ -1.38
UBE2N-204ENST00000549833 ZDHHC6Q9H6R6 413 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 NT5MQ9NPB1 228 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 SEPT10Q9P0V9 454 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 BCCIPQ9P287 314 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBE2N-204ENST00000549833 SARDHQ9UL12 918 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 SNX12Q9UMY4 172 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 POLHQ9Y253 713 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 PIEZO1Q92508 2521 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 ASXL3Q9C0F0 2248 aa6.45□□□□□ -1.38
UBE2N-204ENST00000549833 RP1P56715 2156 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 UNC13CQ8NB66 2214 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CXorf51AA0A1B0GTR3 108 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CTAGE9A4FU28 777 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CAPN8A6NHC0 703 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 DIRC3C9JPN6 131 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 F5H423 210 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MCF2LO15068 1137 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MID1O15344 667 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SGTAO43765 313 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PIGNO95427 931 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 IGSF6O95976 241 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 IL1BP01584 269 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SP9P0CG40 484 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 C6P13671 934 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CCNB1P14635 433 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PTPN3P26045 913 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PEX2P28328 305 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RBL1P28749 1068 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CASQ1P31415 396 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CHRNA3P32297 505 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MMP13P45452 471 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 AGFG1P52594 562 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SNRPD1P62314 119 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 IFI35P80217 286 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 DSC2Q02487 901 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SRSF5Q13243 272 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MTM1Q13496 603 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SNX1Q13596 522 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 TUBA3CQ13748 450 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RFTN1Q14699 578 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CNN3Q15417 329 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CST6Q15828 149 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 KCTD19Q17RG1 926 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MYLK3Q32MK0 819 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 LSM12Q3MHD2 195 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SLC45A4Q5BKX6 768 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MARC1Q5VT66 337 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RNF220Q5VTB9 566 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PAPD7Q5XG87 772 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 ZNF776Q68DI1 518 aaPredicted RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 ERAP2Q6P179 960 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 TUBA3EQ6PEY2 450 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CRIP3Q6Q6R5 217 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SYT10Q6XYQ8 523 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 BZW1Q7L1Q6 419 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 TEX26Q8N6G2 289 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 FRMD1Q8N878 549 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PRSS33Q8NF86 280 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 OR2AP1Q8NGE2 309 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 NSMCE1Q8WV22 266 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RLN3Q8WXF3 142 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 VOPP1Q96AW1 172 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 ARRDC3Q96B67 414 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RGMAQ96B86 450 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SIPA1Q96FS4 1042 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PBKQ96KB5 322 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CAPZA3Q96KX2 299 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 MRGPRX1Q96LB2 322 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CCDC114Q96M63 670 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 ZNF599Q96NL3 588 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 PSKH2Q96QS6 385 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 IL12RB2Q99665 862 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 HEPHQ9BQS7 1158 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 RBM22Q9NW64 420 aaKnown RBP eCLIP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SERGEFQ9UGK8 458 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 IL36AQ9UHA7 158 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 FBXO4Q9UKT5 387 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 DNPEPQ9ULA0 475 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 DMTF1Q9Y222 760 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 TTLL3Q9Y4R7 772 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 CFAP20Q9Y6A4 193 aaKnown RBP6.44□□□□□ -1.38
UBE2N-204ENST00000549833 ZNF292O60281 2723 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
UBE2N-204ENST00000549833 SPTBN2O15020 2390 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 HACD1B0YJ81 288 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 KPNA3O00505 521 aaPredicted RBP6.43□□□□□ -1.38
UBE2N-204ENST00000549833 ALOX15BO15296 676 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 KCNN4O15554 427 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 LIASO43766 372 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 RNASEH1O60930 286 aaKnown RBP6.43□□□□□ -1.38
UBE2N-204ENST00000549833 FAM20BO75063 409 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 TCEA3O75764 348 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 NEBLO76041 1014 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 SCAF4O95104 1147 aaKnown RBP6.43□□□□□ -1.38
UBE2N-204ENST00000549833 POP4O95707 220 aaKnown RBP6.43□□□□□ -1.38
UBE2N-204ENST00000549833 DNTTP04053 509 aa6.43□□□□□ -1.38
UBE2N-204ENST00000549833 UGT2B4P06133 528 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms