RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 UBE2R2Q712K3 238 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-220ENST00000549686 ARMCX6Q7L4S7 300 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 PHACTR4Q8IZ21 702 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 TCAIMQ8N3R3 496 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 MCOLN3Q8TDD5 553 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 TM7SF3Q9NS93 570 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 OXSMQ9NWU1 459 aa17.01■□□□□ 0.31
LETMD1-220ENST00000549686 SUPT3HB4E1H0 165 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 KLF11O14901 512 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 KLK8O60259 260 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 SNX2O60749 519 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 TRIM13O60858 407 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 SUPT3HO75486 399 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 IPO13O94829 963 aaKnown RBP17■□□□□ 0.31
LETMD1-220ENST00000549686 CSF2P04141 144 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 NME1P15531 152 aaKnown RBP17■□□□□ 0.31
LETMD1-220ENST00000549686 ITPKAP23677 461 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 GRK2P25098 689 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 ACADLP28330 430 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 PDHA2P29803 388 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 ALDH3A1P30838 453 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 CTBSQ01459 385 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 GUCY1A3Q02108 690 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 SRSF5Q13243 272 aaKnown RBP17■□□□□ 0.31
LETMD1-220ENST00000549686 TGFBIQ15582 683 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
LETMD1-220ENST00000549686 LIPMQ5VYY2 423 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 ATG16L1Q676U5 607 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 TTC23LQ6PF05 361 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 C10orf107Q8IVU9 208 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 SDR16C5Q8N3Y7 309 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 LILRA3Q8N6C8 439 aaPredicted RBP17■□□□□ 0.31
LETMD1-220ENST00000549686 PDPRQ8NCN5 879 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 PPP1R14CQ8TAE6 165 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 GPBAR1Q8TDU6 330 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 OSGEPL1Q9H4B0 414 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 ERVMER34-1Q9H9K5 563 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 PILRBQ9UKJ0 227 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 ADAM21Q9UKJ8 722 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 IKZF3Q9UKT9 509 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 PCOLCE2Q9UKZ9 415 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 KCNK6Q9Y257 313 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 SLCO1B1Q9Y6L6 691 aa17■□□□□ 0.31
LETMD1-220ENST00000549686 STX16-NPEPL1H3BU86 382 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 STX16O14662 325 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 FFAR2O15552 330 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 DLX3O60479 287 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 SNUPNO95149 360 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 MTHFD2P13995 350 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 CTSEP14091 401 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 GFAPP14136 432 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 JUNDP17535 347 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 KCNA4P22459 653 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 SERPINB5P36952 375 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 HALP42357 657 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 KCNC1P48547 511 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 RPIAP49247 311 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 HNMTP50135 292 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 GYS2P54840 703 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 ALDH18A1P54886 795 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 ABRQ12979 859 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 SIM2Q14190 667 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 UAP1L1Q3KQV9 507 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 SULT1C3Q6IMI6 304 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 CAPRIN2Q6IMN6 1127 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 METTL2BQ6P1Q9 378 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 ABRAXAS1Q6UWZ7 409 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 SYT12Q8IV01 421 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 FBXO39Q8N4B4 442 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 CEP76Q8TAP6 659 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 MANSC1Q9H8J5 431 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 DNAJC28Q9NX36 388 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 CD274Q9NZQ7 290 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 TSR3Q9UJK0 312 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 ADAMTS6Q9UKP5 1117 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 TNPO3Q9Y5L0 923 aaKnown RBP16.99■□□□□ 0.31
LETMD1-220ENST00000549686 HEBP2Q9Y5Z4 205 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 PIKFYVEQ9Y2I7 2098 aa16.99■□□□□ 0.31
LETMD1-220ENST00000549686 DOCK9Q9BZ29 2069 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 WDR91A4D1P6 747 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SRRM3A6NNA2 597 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-220ENST00000549686 A8MT66 165 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 PDZK1P1A8MUH7 402 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 UBXN8O00124 270 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SERPINE1P05121 402 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ANXA5P08758 320 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SLC2A4P14672 509 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ACTR1BP42025 376 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ACTR1AP61163 376 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 HNRNPKP61978 463 aaKnown RBP eCLIP16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ELOCQ15369 112 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SPATS2Q86XZ4 545 aaKnown RBP16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SPNS2Q8IVW8 549 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 DCUN1D3Q8IWE4 304 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ATL1Q8WXF7 558 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 TFGQ92734 400 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-220ENST00000549686 EXT2Q93063 718 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 LOXL4Q96JB6 756 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms