RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UBXN4Q92575 508 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 RSC1A1Q92681 617 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 SLC41A2Q96JW4 573 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 ILKAPQ9H0C8 392 aaPredicted RBP11.88□□□□□ -0.51
DDX54-206ENST00000549271 COPG2Q9UBF2 871 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 OSGIN2Q9Y236 505 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 DNAJC16Q9Y2G8 782 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 PCDHGA10Q9Y5H3 936 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 KLF2Q9Y5W3 355 aaPredicted RBP11.88□□□□□ -0.51
DDX54-206ENST00000549271 DNMT3AQ9Y6K1 912 aaPredicted RBP11.88□□□□□ -0.51
DDX54-206ENST00000549271 SPTBP11277 2137 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 TJP3O95049 919 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 RAB40ALP0C0E4 278 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 RBP3P10745 1247 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 HALP42357 657 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 RRADP55042 308 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 EIF3EP60228 445 aaKnown RBP11.87□□□□□ -0.51
DDX54-206ENST00000549271 PDE1BQ01064 536 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 GPS2Q13227 327 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 MPP3Q13368 585 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 RAPSNQ13702 412 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 KCNAB1Q14722 419 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 SLC1A5Q15758 541 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
DDX54-206ENST00000549271 ANKRD20A2Q5SQ80 823 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 ANKRD20A1Q5TYW2 823 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 ANKRD20A3Q5VUR7 823 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 LYPLAL1Q5VWZ2 237 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 Q6ZS92 163 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 FAM92BQ6ZTR7 304 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 KCNMB4Q86W47 210 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 KMT5CQ86Y97 462 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 SYCE1Q8N0S2 351 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 SLC25A41Q8N5S1 370 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 HES6Q96HZ4 224 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 ZCCHC2Q9C0B9 1178 aaKnown RBP11.87□□□□□ -0.51
DDX54-206ENST00000549271 CHST8Q9H2A9 424 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 BPIFA1Q9NP55 256 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 IL26Q9NPH9 171 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 AGPAT4Q9NRZ5 378 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 HACD3Q9P035 362 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 TCFL5Q9UL49 500 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 WDR37Q9Y2I8 494 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
DDX54-206ENST00000549271 SEC16AO15027 2179 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 A0A1B0GTL3 188 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 TCRBV7S2A1N4TA0A589 114 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 MIF4GDA9UHW6 222 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 CPNE3O75131 537 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 AGTP01019 485 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 SLC4A1P02730 911 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 ADRA1AP35348 466 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 CETN2P41208 172 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 DRG2P55039 364 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 KLF1Q13351 362 aaPredicted RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 GTF2H3Q13889 308 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 LDLRAP1Q5SW96 308 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 KLHL35Q6PF15 583 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 DARS2Q6PI48 645 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 AMZ2Q86W34 360 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 TRAPPC5Q8IUR0 188 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 TXLNBQ8N3L3 684 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 RNF10Q8N5U6 811 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 UBL4BQ8N7F7 174 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 ENDOVQ8N8Q3 282 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 SIDT2Q8NBJ9 832 aaKnown RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 DDHD1Q8NEL9 900 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 IPMKQ8NFU5 416 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 ZFPM2Q8WW38 1151 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 MR1Q95460 341 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 ZNF514Q96K75 400 aaPredicted RBP11.86□□□□□ -0.51
DDX54-206ENST00000549271 TTC25Q96NG3 672 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 CD180Q99467 661 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 TRIM8Q9BZR9 551 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 GBA3Q9H227 469 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 RSPH14Q9UHP6 348 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 SNX7Q9UNH6 387 aa11.86□□□□□ -0.51
DDX54-206ENST00000549271 IGHV5-51A0A0C4DH38 117 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 KCNN4O15554 427 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 POP7O75817 140 aaKnown RBP11.85□□□□□ -0.51
DDX54-206ENST00000549271 CAPN1P07384 714 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 STSP08842 583 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 HLA-DPA1P20036 260 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 PSMB4P28070 264 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 SPAM1P38567 509 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 GLRBP48167 497 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 GEMP55040 296 aa11.85□□□□□ -0.51
DDX54-206ENST00000549271 GSDMDP57764 484 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms