RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 BLOC1S6Q9UL45 172 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
RAPGEF3-218ENST00000548919 LOC100130705A0A1B0GUX0 176 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CBX4O00257 560 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CXCR6O00574 342 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 MITFO75030 526 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 BMP1P13497 986 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 JAK1P23458 1154 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 ISL1P61371 349 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CTF1Q16619 201 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 VARS2Q5ST30 1063 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 MILR1Q7Z6M3 343 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 RHBDF1Q96CC6 855 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 MAGED4Q96JG8 741 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 NODALQ96S42 347 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 ELOVL2Q9NXB9 296 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 DAPK2Q9UIK4 370 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 Q9Y3F1 56 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 STX7O15400 261 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TLR5O60602 858 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 PRAMEF12O95522 483 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 B3GALT4O96024 378 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 SGSHP51688 502 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 RAB15P59190 212 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 KCNC4Q03721 635 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TRAF3Q13114 568 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 LINGO4Q6UY18 593 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 DET1Q7L5Y6 550 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 LIX1Q8N485 282 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 PJA1Q8NG27 643 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 GIPC2Q8TF65 315 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 KCNJ9Q92806 393 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TAMM41Q96BW9 452 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CCDC115Q96NT0 180 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 RBM4Q9BWF3 364 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 ENPP5Q9UJA9 477 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 AGO1Q9UL18 857 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CCL27Q9Y4X3 112 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 SNX5Q9Y5X3 404 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 ELOVL7A1L3X0 281 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 GRXCR2A6NFK2 248 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CYP4B1P13584 511 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 PCMT1P22061 227 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 DCTP40126 519 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 OXCT1P55809 520 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 PON2Q15165 354 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 CTXN3Q4LDR2 81 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
RAPGEF3-218ENST00000548919 TMEM247A6NEH6 219 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ANKRD66B4E2M5 251 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 FFAR2O15552 330 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 GSNP06396 782 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 AKR1A1P14550 325 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 CR2P20023 1033 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 CA5AP35218 305 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 MAP2K4P45985 399 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 EMX1Q04741 257 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 PRR23BQ6ZRT6 265 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 NDNFQ8TB73 568 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 NETO1Q8TDF5 533 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZFP90Q8TF47 636 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 FUBP3Q96I24 572 aaKnown RBP eCLIP13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ALPK1Q96QP1 1244 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZNF347Q96SE7 839 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 CPQQ9Y646 472 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 CHD5Q8TDI0 1954 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 TAPBPO15533 448 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 SERPINA1P01009 418 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 FTH1P02794 183 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 PGRP06401 933 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 FMO3P31513 532 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 AKT1P31749 480 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 IL5RAQ01344 420 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 IL1RL1Q01638 556 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 GSTM4Q03013 218 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 VAC14Q08AM6 782 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 RAPSNQ13702 412 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 SPIDRQ14159 915 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 CLLU1OSQ5K130 101 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 RHNO1Q9BSD3 238 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 BOCQ9BWV1 1114 aa13.87□□□□□ -0.19
RAPGEF3-218ENST00000548919 ALOXE3Q9BYJ1 711 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms