RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PREPP48147 710 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 KLRB1Q12918 225 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 PRKAA1Q13131 559 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 KRT33BQ14525 404 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 POU6F1Q14863 301 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 DBN1Q16643 649 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 P3H1Q32P28 736 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 ZRANB3Q5FWF4 1079 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 ZNF789Q5FWF6 425 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 TMTC4Q5T4D3 741 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 PEX26Q7Z412 305 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 SYVN1Q86TM6 617 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 APLFQ8IW19 511 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 PIANPQ8IYJ0 282 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 CLDN19Q8N6F1 224 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 TTC13Q8NBP0 860 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 OR52E1Q8NGJ3 308 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 SLC35B2Q8TB61 432 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 LRFN5Q96NI6 719 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 TRIM55Q9BYV6 548 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 SRMSQ9H3Y6 488 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 VPS37BQ9H9H4 285 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 C1GALT1Q9NS00 363 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 KCND1Q9NSA2 647 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 TLK1Q9UKI8 766 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 AMFRQ9UKV5 643 aa16.9■□□□□ 0.3
CHMP1A-205ENST00000548650 TCRBV7S2A1N4TA0A589 114 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 GSAPA4D1B5 854 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 MIF4GDA9UHW6 222 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 BTN3A3O00478 584 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 AP2A1O95782 977 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 FTCDO95954 541 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 PDGFAP04085 211 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 TPH1P17752 444 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 CDH3P22223 829 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 PSMA3P25788 255 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 CD151P48509 253 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 CACNG1Q06432 222 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 SEMA5AQ13591 1074 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 IGFBP7Q16270 282 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 PRAMEF17Q5VTA0 474 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 IZUMO3Q5VZ72 239 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 CPZQ66K79 652 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 KIAA1328Q86T90 577 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 UBL4BQ8N7F7 174 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 MR1Q95460 341 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 FERD3LQ96RJ6 166 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 HGH1Q9BTY7 390 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 FANCEQ9HB96 536 aa16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 PIH1D1Q9NWS0 290 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-205ENST00000548650 SEC16AO15027 2179 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 IFRD1O00458 451 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 MSL3P1P0C860 447 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 ST6GAL1P15907 406 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 RORAP35398 523 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 RPA4Q13156 261 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 ASB18Q6ZVZ8 466 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 TAS2R42Q7RTR8 314 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 TAB3Q8N5C8 712 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 OR1L3Q8NH93 324 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 STYXQ8WUJ0 223 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 CDKN2AIPNLQ96HQ2 116 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 BAG1Q99933 345 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 DESI2Q9BSY9 194 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 TMEM121Q9BTD3 319 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 CHST8Q9H2A9 424 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 TFB2MQ9H5Q4 396 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 MVB12BQ9H7P6 319 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 CAPN6Q9Y6Q1 641 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 USP9XQ93008 2570 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 PCSK5Q92824 1860 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 COL12A1Q99715 3063 aa16.88■□□□□ 0.29
CHMP1A-205ENST00000548650 CCDC78A2IDD5 438 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 MROH6A6NGR9 719 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 TMEM150CB9EJG8 249 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 AP2A2O94973 939 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PTMAP06454 111 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 GSTM1P09488 218 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PVRP15151 417 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PRDX3P30048 256 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 LMAN1P49257 510 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 GSDMDP57764 484 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 RPS15P62841 145 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 GSTM4Q03013 218 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 CHAF1BQ13112 559 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PLEKHS1Q5SXH7 462 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 LCN10Q6JVE6 187 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 FAM198BQ6UWH4 519 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 AMIGO1Q86WK6 493 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 ADGRF3Q8IZF5 1079 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 DSELQ8IZU8 1212 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 SYCE1Q8N0S2 351 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 ADAMTS17Q8TE56 1095 aa16.87■□□□□ 0.29
CHMP1A-205ENST00000548650 THAP4Q8WY91 577 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms