RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCH1-215ENST00000547672 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 TRAPPC5Q8IUR0 188 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 SFTPA1Q8IWL2 248 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 AADATQ8N5Z0 425 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 BEND7Q8N7W2 519 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-215ENST00000547672 IL17RCQ8NAC3 791 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 HM13Q8TCT9 377 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 TSPEARQ8WU66 669 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 FAM131CQ96AQ9 280 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 TUBGCP3Q96CW5 907 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 SIPA1Q96FS4 1042 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 COX14Q96I36 57 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 C1QTNF2Q9BXJ5 285 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 OR2AG1Q9H205 316 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-215ENST00000547672 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 SLC2A4RGQ9NR83 387 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 TAS2R1Q9NYW7 299 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 TRPS1Q9UHF7 1281 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 BCAP29Q9UHQ4 241 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 PIKFYVEQ9Y2I7 2098 aa13.16□□□□□ -0.3
PTCH1-215ENST00000547672 A0A1W2PP55 124 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 GRXCR2A6NFK2 248 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 C2CD4DB7Z1M9 353 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PSMD12O00232 456 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 RGS14O43566 566 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PLRG1O43660 514 aaKnown RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SGTAO43765 313 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 UGDHO60701 494 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 MTX2O75431 263 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 CLDN9O95484 217 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 EGFP01133 1207 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 HOXC4P09017 264 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 BMP1P13497 986 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 IDO1P14902 403 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PIK3R1P27986 724 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PGM1P36871 562 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 HSD17B2P37059 387 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 HSPA7P48741 367 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SYVN1Q86TM6 617 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 AMZ2Q86W34 360 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PELI3Q8N2H9 469 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 FAM3CQ92520 227 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 MOCOSQ96EN8 888 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PPP3R2Q96LZ3 170 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SLC25A23Q9BV35 468 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 TEX101Q9BY14 249 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SLC17A9Q9BYT1 436 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 POLG2Q9UHN1 485 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 ADAMTS6Q9UKP5 1117 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 ACSL5Q9ULC5 683 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 SNX6Q9UNH7 406 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 MRPS17Q9Y2R5 130 aaKnown RBP13.15□□□□□ -0.3
PTCH1-215ENST00000547672 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
PTCH1-215ENST00000547672 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 CKAP5Q14008 2032 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3DA0A087WVF3 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3IA0A087WXS9 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3EA0A087X179 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3KA0A087X1G2 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 DYTNA2CJ06 578 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3FA6NER0 549 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 LRRC72A6NJI9 287 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3LB9A6J9 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 H3BQ06 376 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TOR1BO14657 336 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TAPBPO15533 448 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 MGRN1O60291 552 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 ULK1O75385 1050 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 WFS1O76024 890 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 SOD1P00441 154 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3HP0C7X1 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 SRFP11831 508 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TSPAN8P19075 237 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 KELP23276 732 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TRIM23P36406 574 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 MRPL19P49406 292 aaKnown RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 METAP1P53582 386 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TAS2R38P59533 333 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 KCNJ2P63252 427 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 ABRQ12979 859 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms