RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LCN9Q8WX39 176 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 SLC41A2Q96JW4 573 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 PANX3Q96QZ0 392 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 DDX47Q9H0S4 455 aaKnown RBP15.47■□□□□ 0.07
DDX54-204ENST00000546898 TFB2MQ9H5Q4 396 aaKnown RBP15.47■□□□□ 0.07
DDX54-204ENST00000546898 CPNE5Q9HCH3 593 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 PCYOX1Q9UHG3 505 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 GNPTGQ9UJJ9 305 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
DDX54-204ENST00000546898 FAM237BA0A1B0GVD1 139 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 OR6C74A6NCV1 312 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 SDR42E2A6NKP2 422 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 AVILO75366 819 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 NDUFS3O75489 264 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 VAPBO95292 243 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 OGNP20774 298 aaKnown RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 ACADLP28330 430 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 MAGEA3P43357 314 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 PPP1CAP62136 330 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 PTK6Q13882 451 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 COL9A2Q14055 689 aaPredicted RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 IL11RAQ14626 422 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 TMED2Q15363 201 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 TYSND1Q2T9J0 566 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 CASC4Q6P4E1 433 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 SDCCAG8Q86SQ7 713 aaPredicted RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 LDB1Q86U70 411 aaPredicted RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 TBC1D21Q8IYX1 336 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 OTUD6BQ8N6M0 293 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 OR52E1Q8NGJ3 308 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 ASZ1Q8WWH4 475 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 UBL7Q96S82 380 aaPredicted RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 TCF12Q99081 682 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 HGH1Q9BTY7 390 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 P2RY12Q9H244 342 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 SRMSQ9H3Y6 488 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 APMAPQ9HDC9 416 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 POLG2Q9UHN1 485 aa15.46■□□□□ 0.07
DDX54-204ENST00000546898 TMEM184BQ9Y519 407 aaPredicted RBP15.46■□□□□ 0.07
DDX54-204ENST00000546898 UBA6A0AVT1 1052 aaPredicted RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 DNALI1O14645 258 aaPredicted RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 KPNA5O15131 536 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 KDM1AO60341 852 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 RAD1O60671 282 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 APOA4P06727 396 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 CCR7P32248 378 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 ARCN1P48444 511 aaKnown RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 RHDQ02161 417 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 FOXM1Q08050 763 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 BRD3Q15059 726 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 RNASEH2BQ5TBB1 312 aaKnown RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 ARHGAP40Q5TG30 622 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 PTRHD1Q6GMV3 140 aaKnown RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 CES3Q6UWW8 571 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 SYDE1Q6ZW31 735 aaPredicted RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 PCGF5Q86SE9 256 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 CREG2Q8IUH2 290 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 SLC22A15Q8IZD6 547 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 OR4E2Q8NGC2 313 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 OR5K2Q8NHB8 316 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 NKD1Q969G9 470 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 ZNF669Q96BR6 464 aaPredicted RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 MAP3K3Q99759 626 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 CTRCQ99895 268 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 SPRY4Q9C004 299 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 TRIT1Q9H3H1 467 aaKnown RBP15.45■□□□□ 0.06
DDX54-204ENST00000546898 KCND1Q9NSA2 647 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 WDR70Q9NW82 654 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 RNF14Q9UBS8 474 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 ASIC3Q9UHC3 531 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 PILRAQ9UKJ1 303 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 POMT2Q9UKY4 750 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 ASF1AQ9Y294 204 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 VPS9D1Q9Y2B5 631 aa15.45■□□□□ 0.06
DDX54-204ENST00000546898 IGHV5-51A0A0C4DH38 117 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 GOLGA8MH3BSY2 632 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 CCDC188H7C350 402 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 GPC4O75487 556 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 STK17BO94768 372 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 ZBTB11O95625 1053 aaPredicted RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 DLGAP3O95886 979 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 RPN2P04844 631 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 FGF5P12034 268 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 ITGB6P18564 788 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 SHMT2P34897 504 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 PAFAH1B1P43034 410 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 ARL4DP49703 201 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 KPNA2P52292 529 aaKnown RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 ADARP55265 1226 aaKnown RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 SH3BP2P78314 561 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 ACY1Q03154 408 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 DHX34Q14147 1143 aaKnown RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 MAP7Q14244 749 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 ANKRD20A4Q4UJ75 823 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 DNAJC21Q5F1R6 531 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms