RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 OGFOD2Q6N063 350 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 TLDC1Q6P9B6 456 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 Q6ZVL8 140 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 MTSS1LQ765P7 747 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 HEATR4Q86WZ0 1026 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 PIANPQ8IYJ0 282 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 COLGALT2Q8IYK4 626 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 ANKLE1Q8NAG6 615 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 KLHDC9Q8NEP7 349 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 NLE1Q9NVX2 485 aaPredicted RBP15.39■□□□□ 0.05
CUX1-211ENST00000546411 FNIP2Q9P278 1114 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 TEKT2Q9UIF3 430 aa15.39■□□□□ 0.05
CUX1-211ENST00000546411 HNRNPCL2B2RXH8 293 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 ATG13O75143 517 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 EIF2S1P05198 315 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 ALOX12P18054 663 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 ARSIQ5FYB1 569 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 CASP12Q6UXS9 341 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 CYP4Z1Q86W10 505 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 ZDHHC21Q8IVQ6 265 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SLC15A3Q8IY34 581 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TRPV3Q8NET8 790 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SHKBP1Q8TBC3 707 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 IGSF5Q9NSI5 407 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 PAIP2BQ9ULR5 123 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 TESMINQ9Y4I5 508 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 AQP12BA6NM10 295 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SLC9A3R1O14745 358 aaPredicted RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 SGTAO43765 313 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 RSL1D1O76021 490 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 VARSP26640 1264 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 DGKEP52429 567 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TRAP1Q12931 704 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 NR1D2Q14995 579 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 CST9Q5W186 159 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TMC5Q6UXY8 1006 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 FAM124AQ86V42 546 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 AQP12AQ8IXF9 295 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TERB1Q8NA31 727 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 VANGL1Q8TAA9 524 aaPredicted RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 DPF3Q92784 378 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 KLK6Q92876 244 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 BOCQ9BWV1 1114 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 MRM3Q9HC36 420 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 DEC1Q9P2X7 70 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SLCO3A1Q9UIG8 710 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 WNT6Q9Y6F9 365 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 MAGEA3P43357 314 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 PHKG1Q16816 387 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SVOPQ8N4V2 548 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 C2orf15Q8WU43 125 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 HEPHQ9BQS7 1158 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 RREB1Q92766 1687 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 ANGPTL1O95841 491 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 OPN1SWP03999 348 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 CYP11A1P05108 521 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 RGRP47804 291 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 HTR6P50406 440 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 NANOGP8Q6NSW7 305 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 AHSA2Q719I0 299 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TAS1R1Q7RTX1 841 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 DSG4Q86SJ6 1040 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 BEND7Q8N7W2 519 aaPredicted RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 ZNF513Q8N8E2 541 aaPredicted RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 GIPC3Q8TF64 312 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 SLC22A17Q8WUG5 538 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 TMBIM1Q969X1 311 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 BIRC7Q96CA5 298 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 NANOGQ9H9S0 305 aa15.38■□□□□ 0.05
CUX1-211ENST00000546411 CFAP20Q9Y6A4 193 aaKnown RBP15.38■□□□□ 0.05
CUX1-211ENST00000546411 BCKDKO14874 412 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 EPHX1P07099 455 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 FESP07332 822 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 CAPGP40121 348 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 MADCAM1Q13477 382 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 CAPN13Q6MZZ7 669 aaPredicted RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 ANKRD26P1Q6NSI1 321 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 KDELC1Q6UW63 502 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 TRIM74Q86UV6 250 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 KCNJ9Q92806 393 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 USP3Q9Y6I4 520 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 DYTNA2CJ06 578 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 ADAM12O43184 909 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 NADKO95544 446 aaPredicted RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 KRT8P05787 483 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 PGRP06401 933 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 MANFP55145 182 aaKnown RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 ZNF423Q2M1K9 1284 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 RAB41Q5JT25 222 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 INTS11Q5TA45 600 aaKnown RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 ARMC3Q5W041 872 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 DEF8Q6ZN54 512 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 MAVSQ7Z434 540 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 MRPL10Q7Z7H8 261 aaKnown RBP15.37■□□□□ 0.05
CUX1-211ENST00000546411 XAGE5Q8WWM1 108 aa15.37■□□□□ 0.05
CUX1-211ENST00000546411 EPS8L2Q9H6S3 715 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms