RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 C19orf48Q6RUI8 117 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 CES3Q6UWW8 571 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 SDCCAG8Q86SQ7 713 aaPredicted RBP11.56□□□□□ -0.56
YBX3-217ENST00000546164 OOSP2Q86WS3 158 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 FAM129CQ86XR2 697 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 DTX1Q86Y01 620 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 SLC22A15Q8IZD6 547 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 CARFQ8N187 725 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 AGGF1Q8N302 714 aaeCLIP11.56□□□□□ -0.56
YBX3-217ENST00000546164 ASZ1Q8WWH4 475 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 UBXN4Q92575 508 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 LPGAT1Q92604 370 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 ART4Q93070 314 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 FCRL3Q96P31 734 aaPredicted RBP11.56□□□□□ -0.56
YBX3-217ENST00000546164 PANX3Q96QZ0 392 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 ZPBPQ9BS86 351 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 HRASLS2Q9NWW9 162 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 SLC39A1Q9NY26 324 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 KLHL3Q9UH77 587 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 GNPTGQ9UJJ9 305 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 B3GALT1Q9Y5Z6 326 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 LOC400499M0QZD8 3231 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 IGSF10Q6WRI0 2623 aa11.56□□□□□ -0.56
YBX3-217ENST00000546164 TLCD2A6NGC4 264 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 AGRPO00253 132 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 PFDN6O15212 129 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 KLK10O43240 276 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 SLCO2B1O94956 709 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 DR1Q01658 176 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 KRT33BQ14525 404 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 MORF4L2Q15014 288 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 SYTL3Q4VX76 610 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 DCAF12Q5T6F0 453 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 CACHD1Q5VU97 1274 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 NEPROQ6NW34 567 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 KMT5CQ86Y97 462 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 CILP2Q8IUL8 1156 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 LMNTD2Q8IXW0 634 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 TBC1D21Q8IYX1 336 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 OR52E1Q8NGJ3 308 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 LKAAEAR1Q8TD35 194 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 SNRNP27Q8WVK2 155 aaKnown RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 JPH3Q8WXH2 748 aaPredicted RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 PMEPA1Q969W9 287 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 ZNF669Q96BR6 464 aaPredicted RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 NAF1Q96HR8 494 aaKnown RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 SLC41A2Q96JW4 573 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 BIRC8Q96P09 236 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 FERD3LQ96RJ6 166 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 TRIM56Q9BRZ2 755 aaKnown RBP11.55□□□□□ -0.56
YBX3-217ENST00000546164 TWSG1Q9GZX9 223 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 PRORYQ9H606 182 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 CDYLQ9Y232 598 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 ASF1AQ9Y294 204 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 VPS9D1Q9Y2B5 631 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
YBX3-217ENST00000546164 OR6C74A6NCV1 312 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 IQCF5A8MTL0 148 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 GOLGA8KD6RF30 607 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 H3BMM5 538 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 STMND1H3BQB6 276 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 GOLGA8TH3BQL2 631 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 KPNA5O15131 536 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 RASSF9O75901 435 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 ESR1P03372 595 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 APOA4P06727 396 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 PGAM1P18669 254 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 AOAHP28039 575 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 PPP1CAP62136 330 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 DNAJC21Q5F1R6 531 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 CTSL3PQ5NE16 218 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 BROXQ5VW32 411 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 ANKS6Q68DC2 871 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 PTRHD1Q6GMV3 140 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 CEACAM20Q6UY09 585 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 FAM92BQ6ZTR7 304 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 CENPUQ71F23 418 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 C17orf53Q8N3J3 647 aaPredicted RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 OTUD6BQ8N6M0 293 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 OR5K2Q8NHB8 316 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 LCN9Q8WX39 176 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 STAMBPL1Q96FJ0 436 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 TRIT1Q9H3H1 467 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 SRMSQ9H3Y6 488 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 INTS10Q9NVR2 710 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
YBX3-217ENST00000546164 POLG2Q9UHN1 485 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 POMT2Q9UKY4 750 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 MAD1L1Q9Y6D9 718 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 FAM169AQ9Y6X4 670 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms