RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CEBPDP49716 269 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 NDST2P52849 883 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CASP6P55212 293 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 DEFA1P59665 94 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 DEFA3P59666 94 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 RPS7P62081 194 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ARF6P62330 175 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 PTPN11Q06124 597 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 C17orf67Q0P5P2 114 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TDGQ13569 410 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CBFBQ13951 182 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 DUSP6Q16828 381 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 AP5B1Q2VPB7 878 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SPATA46Q5T0L3 261 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CCNYL2Q5T2Q4 361 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ARMC12Q5T9G4 340 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ATPAF1Q5TC12 328 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 MANEALQ5VSG8 457 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SEL1L3Q68CR1 1132 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TIGD3Q6B0B8 471 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 OR5M10Q6IEU7 315 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 KCNT2Q6UVM3 1135 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ZPBP2Q6X784 338 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 COLCA1Q6ZS62 124 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 C11orf57Q6ZUT1 292 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SV2AQ7L0J3 742 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SLC26A9Q7LBE3 791 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 GPR155Q7Z3F1 870 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TRMT11Q7Z4G4 463 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 AMIGO1Q86WK6 493 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 DHFR2Q86XF0 187 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 KBTBD2Q8IY47 623 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CENPLQ8N0S6 344 aaPredicted RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 FAM185AQ8N0U4 392 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 EID3Q8N140 333 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ARMC10Q8N2F6 343 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SVOPLQ8N434 492 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 GUF1Q8N442 669 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 KCTD6Q8NC69 237 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CAMKVQ8NCB2 501 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF248Q8NDW4 579 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TMEM104Q8NE00 496 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 OR52H1Q8NGJ2 320 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 PRR7Q8TB68 274 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TSEN15Q8WW01 171 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 LINGO1Q96FE5 620 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 DUS3LQ96G46 650 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 PAGE5Q96GU1 130 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 ZBTB18Q99592 522 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 THUMPD3Q9BV44 507 aaKnown RBP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 NLNQ9BYT8 704 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 OSBPL8Q9BZF1 889 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 GPR63Q9BZJ6 419 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBE4A-203ENST00000545354 OR52A5Q9H2C5 316 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 LRRN3Q9H3W5 708 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 MED17Q9NVC6 651 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 PZPP20742 1482 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 SYCP2Q9BX26 1530 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 LAMC1P11047 1609 aa5.07□□□□□ -1.6
UBE4A-203ENST00000545354 TEX13CA0A0J9YWL9 993 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 C2orf92A0A1B0GVN3 265 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 USP17L4A6NCW7 530 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 A6NIZ1 184 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 FSCN2O14926 492 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 STX7O15400 261 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 GYG2O15488 501 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 HTRA2O43464 458 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 PLIN3O60664 434 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 MITFO75030 526 aaPredicted RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 MED6O75586 246 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 SLC22A5O76082 557 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 SORBS2O94875 1100 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 BCL10O95999 233 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 CRYGCP07315 174 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 USP17L8P0C7I0 530 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 ACSM4P0C7M7 580 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 SLC2A4P14672 509 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 UQCRC1P31930 480 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 HNRNPH3P31942 346 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 CCR7P32248 378 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 GJC1P36383 396 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 RPS19P39019 145 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 TMPOP42166 694 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 BRCC3P46736 316 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 PRKAG1P54619 331 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 TMBIM6P55061 237 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 ARL4CP56559 192 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 SNAP25P60880 206 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 MAGOHP61326 146 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 RPS8P62241 208 aaKnown RBP5.06□□□□□ -1.6
UBE4A-203ENST00000545354 CHRNDQ07001 517 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 SEMA3BQ13214 749 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 IL18Q14116 193 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 TFDP2Q14188 446 aa5.06□□□□□ -1.6
UBE4A-203ENST00000545354 CTTNQ14247 550 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms