RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 GBX1Q14549 363 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 ABRAXAS2Q15018 415 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 RFX4Q33E94 735 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 LRIF1Q5T3J3 769 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 TTC23Q5W5X9 447 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 LINGO4Q6UY18 593 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 C16orf59Q7L2K0 433 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 ARHGAP22Q7Z5H3 698 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
PAAF1-215ENST00000544909 TMEM150AQ86TG1 271 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 SPNS2Q8IVW8 549 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 ZNF786Q8N393 782 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 DTWD1Q8N5C7 304 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 OR2AP1Q8NGE2 309 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 FIBINQ8TAL6 211 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 SDCCAG3Q96C92 435 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 ECHDC3Q96DC8 303 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 CPEB1Q9BZB8 566 aaKnown RBP12.23□□□□□ -0.45
PAAF1-215ENST00000544909 NSUN3Q9H649 340 aaKnown RBP12.23□□□□□ -0.45
PAAF1-215ENST00000544909 C1orf109Q9NX04 203 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
PAAF1-215ENST00000544909 MICAL3Q7RTP6 2002 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 TRBV5-3A0A0A0MS03 114 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 TAPBPO15533 448 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 PRMT3O60678 531 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 UGDHO60701 494 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 STK16O75716 305 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SLC25A14O95258 325 aaPredicted RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 CPNE6O95741 557 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ALPLP05186 524 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 PGRP06401 933 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 MTHFD1P11586 935 aaKnown RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 JUNBP17275 347 aaPredicted RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 AP1S2P56377 157 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 RAB15P59190 212 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SNRPD1P62314 119 aaKnown RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ABRQ12979 859 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 DAG1Q14118 895 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 MAPKAPK3Q16644 382 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 RFTN2Q52LD8 501 aaPredicted RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SLC2A7Q6PXP3 512 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 FAM151BQ6UXP7 276 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 NEK10Q6ZWH5 1172 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 USP45Q70EL2 814 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 IFNEQ86WN2 208 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SLC39A11Q8N1S5 342 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ZNF548Q8NEK5 533 aaPredicted RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ADAMTS19Q8TE59 1207 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 TESCQ96BS2 214 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 TMEM169Q96HH4 297 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 MAGED4Q96JG8 741 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ZNF583Q96ND8 569 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 DPY30Q9C005 99 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 CEP44Q9C0F1 390 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 HIPK3Q9H422 1215 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 SLC32A1Q9H598 525 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 RMND5AQ9H871 391 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 HCSTQ9UBK5 93 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 FCF1Q9Y324 198 aaKnown RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 NEUROG3Q9Y4Z2 214 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
PAAF1-215ENST00000544909 INSL5Q9Y5Q6 135 aa12.22□□□□□ -0.45
PAAF1-215ENST00000544909 KLHL33A6NCF5 533 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 FAM220BPB1ANY3 271 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 H3BSA7 217 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 PRRG1O14668 218 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 NUAK1O60285 661 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 CLDN9O95484 217 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 URODP06132 367 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 MPC1LP0DKB6 136 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 BPIP17213 487 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 DCKP27707 260 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 MAPK9P45984 424 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 HTR6P50406 440 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 OR4D2P58180 307 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 IL18R1Q13478 541 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 KCNC3Q14003 757 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ZC3H12BQ5HYM0 836 aaKnown RBP12.21□□□□□ -0.45
PAAF1-215ENST00000544909 RBM48Q5RL73 367 aaKnown RBP12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 EID3Q8N140 333 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ELMOD1Q8N336 334 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 PPP1R14BQ96C90 147 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ZNF641Q96N77 438 aaPredicted RBP12.21□□□□□ -0.45
PAAF1-215ENST00000544909 ZNF558Q96NG5 402 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 TMEM74Q96NL1 305 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 HHIPQ96QV1 700 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 EGFL8Q99944 293 aa12.21□□□□□ -0.45
PAAF1-215ENST00000544909 LRTM1Q9HBL6 345 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms