RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 POC1B-GALNT4F8VUJ3 575 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 CD9P21926 228 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 ACADLP28330 430 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 ATP5DP30049 168 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SKIV2L2P42285 1042 aaKnown RBP13.3□□□□□ -0.28
SP140-213ENST00000543928 PGGT1BP53609 377 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 LIMK2P53671 638 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 TAS2R39P59534 338 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 PDAP1Q13442 181 aaKnown RBP13.3□□□□□ -0.28
SP140-213ENST00000543928 PUM1Q14671 1186 aaKnown RBP eCLIP13.3□□□□□ -0.28
SP140-213ENST00000543928 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 ZNF761Q86XN6 746 aaPredicted RBP13.3□□□□□ -0.28
SP140-213ENST00000543928 CPNE9Q8IYJ1 553 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SLC44A1Q8WWI5 657 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 TFGQ92734 400 aaPredicted RBP13.3□□□□□ -0.28
SP140-213ENST00000543928 SH3KBP1Q96B97 665 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SLC38A3Q99624 504 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 GPR22Q99680 433 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 CCDC3Q9BQI4 270 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 TOR4AQ9NXH8 423 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SLC39A10Q9ULF5 831 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 HEBP2Q9Y5Z4 205 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
SP140-213ENST00000543928 RFPL3O75679 317 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 GP1BAP07359 652 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 INHBAP08476 426 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 FTH1P19P0C7X4 201 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 PNLIPP16233 465 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 HSD17B3P37058 310 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 MSH2P43246 934 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 SLC12A2P55011 1212 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 POU4F1Q01851 419 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 ABRQ12979 859 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 ILKQ13418 452 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 KRT33BQ14525 404 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 TMEM26Q6ZUK4 368 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 SLCO6A1Q86UG4 719 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 RBM12BQ8IXT5 1001 aaKnown RBP13.29□□□□□ -0.28
SP140-213ENST00000543928 Q8N9G6 341 aaPredicted RBP13.29□□□□□ -0.28
SP140-213ENST00000543928 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 CFAP61Q8NHU2 1237 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 CAVIN3Q969G5 261 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 CAB39LQ9H9S4 337 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 RUVBL2Q9Y230 463 aaKnown RBP13.29□□□□□ -0.28
SP140-213ENST00000543928 ASF1AQ9Y294 204 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 PCDHGA1Q9Y5H4 931 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 IKBKGQ9Y6K9 419 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 COLEC10Q9Y6Z7 277 aa13.29□□□□□ -0.28
SP140-213ENST00000543928 CBSLP0DN79 551 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 ENO3P13929 434 aaPredicted RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 NDUFS1P28331 727 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 ALDH4A1P30038 563 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 CBSP35520 551 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 GPR3P46089 330 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 ID4P47928 161 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 OR1D5P58170 312 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 GPR18Q14330 331 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 ZNF460Q14592 562 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 USP10Q14694 798 aaKnown RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 NR1D2Q14995 579 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 UNC5DQ6UXZ4 953 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 SPRED1Q7Z699 444 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 CEP97Q8IW35 865 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 OR5AR1Q8NGP9 310 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 DCAKDQ8WVC6 231 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 JPH3Q8WXH2 748 aaPredicted RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 TBC1D10AQ9BXI6 508 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 TRIT1Q9H3H1 467 aaKnown RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 MVB12BQ9H7P6 319 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 UCK1Q9HA47 277 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
SP140-213ENST00000543928 NFS1Q9Y697 457 aa13.28□□□□□ -0.28
SP140-213ENST00000543928 HMX2A2RU54 273 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 LILRA5A6NI73 299 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.29
SP140-213ENST00000543928 CASC3O15234 703 aaKnown RBP13.27□□□□□ -0.29
SP140-213ENST00000543928 PHGDHO43175 533 aaKnown RBP13.27□□□□□ -0.29
SP140-213ENST00000543928 B4GAT1O43505 415 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 DKK1O94907 266 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 MATN4O95460 622 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 MPC1LP0DKB6 136 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 STMN1P16949 149 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 MAPK9P45984 424 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 RGS4P49798 205 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 SERPINB9P50453 376 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 IL2P60568 153 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 CCL7P80098 99 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 E2F1Q01094 437 aa13.27□□□□□ -0.29
SP140-213ENST00000543928 PRKG2Q13237 762 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms