RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 IFNB1P01574 187 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 THEGLP0DJG4 465 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 KITP10721 976 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 DHPSP49366 369 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CCR9P51686 369 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SUOXP51687 545 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ADPRHP54922 357 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ELP6Q0PNE2 266 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SIX1Q15475 284 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 UGP2Q16851 508 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PLK5Q496M5 336 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FAM182AQ5T1J6 154 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PIP5KL1Q5T9C9 394 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 AGBL4Q5VU57 503 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 DRICH1Q6PGQ1 229 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SLC44A2Q8IWA5 706 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SPACA3Q8IXA5 215 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 TMEFF1Q8IYR6 380 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CADM4Q8NFZ8 388 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 OR2T34Q8NGX1 318 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CEP70Q8NHQ1 597 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC110Q8TBZ0 833 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 UTP15Q8TED0 518 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SNX19Q92543 992 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 MAGOHBQ96A72 148 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 IMP4Q96G21 291 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FEM1CQ96JP0 617 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SPATA13Q96N96 652 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PPP1R2P1Q96PQ5 205 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FCRL5Q96RD9 977 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ADGRE3Q9BY15 652 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PCED1AQ9H1Q7 454 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 GBA3Q9H227 469 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 USP29Q9HBJ7 922 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SMARCAL1Q9NZC9 954 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 RNF14Q9UBS8 474 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FAM153AQ9UHL3 310 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CKAP5Q14008 2032 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 TSPAN11A1L157 253 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC14BA6NHZ5 514 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 WNT9AO14904 365 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 HYAL3O43820 417 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PMPCBO75439 489 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 GCATO75600 419 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ANXA9O76027 345 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PGLSO95336 258 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 MT-CYBP00156 380 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LPLP06858 475 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 MMP2P08253 660 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CYP2A6P11509 494 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ATP5F1P24539 256 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 NBL1P41271 181 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PPP5CP53041 499 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LIMK1P53667 647 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PRKAA2P54646 552 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 GEMP55040 296 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 TRAF2Q12933 501 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 MPP3Q13368 585 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 OASLQ15646 514 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LPAL2Q16609 132 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 NKPD1Q17RQ9 610 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PARP6Q2NL67 630 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 P3H1Q32P28 736 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 KRTCAP3Q53RY4 240 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC73Q5JTD7 316 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SPDYCQ5MJ68 293 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LYSMD4Q5XG99 296 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PMS2CLQ68D20 193 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 KIAA0895LQ68EN5 471 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 NEK5Q6P3R8 708 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FRMD7Q6ZUT3 714 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PRPF39Q86UA1 669 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SLC9B2Q86UD5 537 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ZSWIM9Q86XI8 627 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PRELID2Q8N945 189 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LPCAT1Q8NF37 534 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SPATA22Q8NHS9 363 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PIWIL2Q8TC59 973 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CXorf40AQ8TE69 158 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 RUBCNQ92622 972 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FAM131CQ96AQ9 280 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 VOPP1Q96AW1 172 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC45Q96CN5 670 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 RMDN1Q96DB5 314 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ECHDC3Q96DC8 303 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 NSMCE3Q96MG7 304 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 HSPA12BQ96MM6 686 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 FSD1LQ9BXM9 530 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 TDRD1Q9BXT4 1180 aaKnown RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 DUSP15Q9H1R2 295 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 EPC1Q9H2F5 836 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PRDM13Q9H4Q3 707 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 C6orf106Q9H6K1 298 aaPredicted RBP5.07□□□□□ -1.6
CLIP1-217ENST00000543205 PCDH9Q9HC56 1237 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 SMURF1Q9HCE7 757 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 GPR27Q9NS67 375 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 CHKBQ9Y259 395 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 AAR2Q9Y312 384 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms