RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TRMT1Q9NXH9 659 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 CHMP5Q9NZZ3 219 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 WDR35Q9P2L0 1181 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 OSGIN1Q9UJX0 560 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 POU2F3Q9UKI9 436 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CFAP45Q9UL16 551 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 ACSL5Q9ULC5 683 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 RRP15Q9Y3B9 282 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 ROCK1Q13464 1354 aa3.15□□□□□ -1.9
USP28-210ENST00000542033 LOC102723996A0A087X1L8 192 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 GPR75-ASB3A0A0A6YYF3 556 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 KANSL1LA0AUZ9 987 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 EIF4E1BA6NMX2 242 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 OGG1O15527 345 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TTI1O43156 1089 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 NEMFO60524 1076 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 RTN2O75298 545 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TGDSO95455 350 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 FYNP06241 537 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ATP5BP06576 529 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 ATP6V1B1P15313 513 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 PTAFRP25105 342 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 S100A5P33763 92 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 SLC8A3P57103 927 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TAS2R40P59535 323 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CTAG1AP78358 180 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CAMK2DQ13557 499 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 RCN1Q15293 331 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 MYLK3Q32MK0 819 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ODF2Q5BJF6 829 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ZNF805Q5CZA5 627 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 RARS2Q5T160 578 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 TRNP1Q6NT89 227 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 BRAT1Q6PJG6 821 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 PET117Q6UWS5 81 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CCBE1Q6UXH8 406 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 SYT10Q6XYQ8 523 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 GBP6Q6ZN66 633 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 RBPMS2Q6ZRY4 209 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 CLEC17AQ6ZS10 378 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 MFSD6Q6ZSS7 791 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TUBA1AQ71U36 451 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TSPAN33Q86UF1 283 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 DZIP1Q86YF9 867 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 ARID3BQ8IVW6 561 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 MFN1Q8IWA4 741 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ODF3L1Q8IXM7 274 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CCDC170Q8IYT3 715 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ZNF34Q8IZ26 560 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 GUF1Q8N442 669 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 HJURPQ8NCD3 748 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 Q8NFD4 153 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TSPAN14Q8NG11 270 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 OR1J2Q8NGS2 313 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 OR8K5Q8NH50 307 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 SPATA22Q8NHS9 363 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ACMSDQ8TDX5 336 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 PTPMT1Q8WUK0 201 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 N4BP2L2Q92802 583 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 TAAR8Q969N4 342 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 SIPA1Q96FS4 1042 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 LMLNQ96KR4 655 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 NEK1Q96PY6 1258 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 NUDCD1Q96RS6 583 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 RUFY1Q96T51 708 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TUBA1CQ9BQE3 449 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CAPS2Q9BXY5 557 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 C2orf40Q9H1Z8 148 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 TCF7L2Q9NQB0 619 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ZNF446Q9NWS9 450 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 GDE1Q9NZC3 331 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 COPG2Q9UBF2 871 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 UBA2Q9UBT2 640 aaPredicted RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 STK39Q9UEW8 545 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 DDX25Q9UHL0 483 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 TUBE1Q9UJT0 475 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 FBXW11Q9UKB1 542 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 FBXL2Q9UKC9 423 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 NUDCQ9Y266 331 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 KLHL20Q9Y2M5 609 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 NOSIPQ9Y314 301 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 SNX5Q9Y5X3 404 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 GMEB1Q9Y692 573 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 CLIC4Q9Y696 253 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 ARHGAP31Q2M1Z3 1444 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 PDS5AQ29RF7 1337 aaKnown RBP3.15□□□□□ -1.91
USP28-210ENST00000542033 CEP164Q9UPV0 1460 aa3.15□□□□□ -1.91
USP28-210ENST00000542033 VIRMAQ69YN4 1812 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 TMEM94Q12767 1356 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 RPAP1Q9BWH6 1393 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 A0A087WUV0 522 aaPredicted RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 LNP1A1A4G5 178 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 GTPBP10A4D1E9 387 aaKnown RBP3.14□□□□□ -1.91
USP28-210ENST00000542033 URADA6NGE7 173 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 BOLA2-SMG1P6H3BVE0 249 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 CPLX1O14810 134 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 ATP2A1O14983 1001 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 SLC7A4O43246 635 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 BUB3O43684 328 aa3.14□□□□□ -1.91
USP28-210ENST00000542033 DIAPH2O60879 1101 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms