RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CACNA2D3Q8IZS8 1091 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CCAR2Q8N163 923 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 FSTL5Q8N475 847 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 FAM109AQ8N4B1 249 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CEP76Q8TAP6 659 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 RXFP2Q8WXD0 754 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 RLN3Q8WXF3 142 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 SORCS1Q8WY21 1168 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ATG4AQ8WYN0 398 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PIGKQ92643 395 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 SYN2Q92777 582 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ZDHHC12Q96GR4 267 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CFAP57Q96MR6 1250 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PRICKLE1Q96MT3 831 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PCDHB18PQ96TA0 734 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PRMT1Q99873 361 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DPCDQ9BVM2 203 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 C1QTNF3Q9BXJ4 246 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 NUSAP1Q9BXS6 441 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ZYG11BQ9C0D3 744 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 MAGEH1Q9H213 219 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM245Q9H330 911 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 TSPY26PQ9H489 355 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 HAUS4Q9H6D7 363 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 MRPL47Q9HD33 250 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PIGVQ9NUD9 493 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PARVAQ9NVD7 372 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DONSONQ9NYP3 566 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 XPO7Q9UIA9 1087 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ERVW-1Q9UQF0 538 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DGKBQ9Y6T7 804 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 MYO18AQ92614 2054 aaKnown RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 IGHV1OR15-9A0A0B4J2B8 117 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 EDDM13A0A1B0GTR0 161 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC189A1A4V9 331 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 BCLAF3A2AJT9 711 aaKnown RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TMCO5BA8MYB1 307 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 E9PAM4 449 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PEX1O43933 1283 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 RTN2O75298 545 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 RNF8O76064 485 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 USP1O94782 785 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 SERPING1P05155 500 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 MYBL1P10243 752 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 HLA-EP13747 358 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PECAM1P16284 738 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PRKCHP24723 683 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 OR1E1P30953 314 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 HOXC13P31276 330 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 RFC1P35251 1148 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ADRA1BP35368 520 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 HOXD12P35452 270 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PRKCIP41743 596 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 RENBPP51606 427 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ATXN3P54252 364 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ZBED6P86452 979 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 SLC25A3Q00325 362 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF33AQ06730 810 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PTP4A2Q12974 167 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TP53BP2Q13625 1128 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ATP1A4Q13733 1029 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TUBA3CQ13748 450 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TBCCQ15814 346 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CDO1Q16878 200 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 DUOXA1Q1HG43 343 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 HNRNPA1L2Q32P51 320 aaKnown RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC14Q49A88 953 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ACCSLQ4AC99 568 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FSCBQ5H9T9 825 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TMTC4Q5T4D3 741 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FAM46CQ5VWP2 391 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF776Q68DI1 518 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 RETSATQ6NUM9 610 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 SCYL2Q6P3W7 929 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 TUBA3EQ6PEY2 450 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 WDR59Q6PJI9 974 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CLEC9AQ6UXN8 241 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 SLFN11Q7Z7L1 901 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 DSG4Q86SJ6 1040 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PHLDB2Q86SQ0 1253 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FAM131BQ86XD5 332 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 NRSN1Q8IZ57 195 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 MCOLN2Q8IZK6 566 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 APCDD1Q8J025 514 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 EMC1Q8N766 993 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CADM4Q8NFZ8 388 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 MBD3L2Q8NHZ7 208 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 PROKR1Q8TCW9 393 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 GANCQ8TET4 914 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FAM172AQ8WUF8 416 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 STYXQ8WUJ0 223 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 WDR60Q8WVS4 1066 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 CENPIQ92674 756 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 IGSF8Q969P0 613 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FUBP1Q96AE4 644 aaKnown RBP5.43□□□□□ -1.54
CPSF7-220ENST00000541963 FKBP10Q96AY3 582 aa5.43□□□□□ -1.54
CPSF7-220ENST00000541963 EID2BQ96D98 161 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms