RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 PPIL6Q8IXY8 311 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 KRT222Q8N1A0 295 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 SGSM3Q96HU1 749 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 SLC12A9Q9BXP2 914 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 MRM3Q9HC36 420 aaKnown RBP11.14□□□□□ -0.63
TMEM258-205ENST00000540434 SARS2Q9NP81 518 aaKnown RBP11.14□□□□□ -0.63
TMEM258-205ENST00000540434 WASH6PQ9NQA3 447 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 GALPQ9UBC7 116 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 ANAPC2Q9UJX6 822 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 SNX24Q9Y343 169 aa11.14□□□□□ -0.63
TMEM258-205ENST00000540434 DNMT3AQ9Y6K1 912 aaPredicted RBP11.14□□□□□ -0.63
TMEM258-205ENST00000540434 SDR42E2A6NKP2 422 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 CCDC188H7C350 402 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 SEMA7AO75326 666 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 ITIH1P19827 911 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 IDSP22304 550 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 GNLYP22749 145 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PAFAH1B1P43034 410 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 ITGA8P53708 1063 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PPP1CAP62136 330 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PRAMEP78395 509 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 C16orf72Q14CZ0 275 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 BRD3Q15059 726 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 HIBCHQ6NVY1 386 aaPredicted RBP11.13□□□□□ -0.63
TMEM258-205ENST00000540434 AFTPHQ6ULP2 937 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PACS1Q6VY07 963 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 CENPUQ71F23 418 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 NLRP9Q7RTR0 991 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 VRK3Q8IV63 474 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 ZSCAN1Q8NBB4 408 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PHC3Q8NDX5 983 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 OR6C4Q8NGE1 309 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 ZNF669Q96BR6 464 aaPredicted RBP11.13□□□□□ -0.63
TMEM258-205ENST00000540434 DCUN1D1Q96GG9 259 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 GFM1Q96RP9 751 aaKnown RBP11.13□□□□□ -0.63
TMEM258-205ENST00000540434 CCM2Q9BSQ5 444 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 P2RY12Q9H244 342 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 OR52A5Q9H2C5 316 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 COG4Q9H9E3 785 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 SLC40A1Q9NP59 571 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 CATSPERZQ9NTU4 200 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 RNF14Q9UBS8 474 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 PISDQ9UG56 409 aa11.13□□□□□ -0.63
TMEM258-205ENST00000540434 KIR2DS5A0A0G2JLQ3 304 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 A0A0G2JNG1 304 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 IGHV5-10-1A0A0J9YXX1 117 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 BHMG1C9JSJ3 638 aaPredicted RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 KIR2DS3K7RE56 304 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 PRAMEF10O60809 474 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 SEC31AO94979 1220 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 TPBGLP0DKB5 382 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 TYRP1P17643 537 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CCKBRP32239 447 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CCR7P32248 378 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 ETV5P41161 510 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 NSG1P42857 185 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 GPR3P46089 330 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CD97P48960 835 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CSE1LP55060 971 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 GPR18Q14330 331 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 ITIH4Q14624 930 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 KIR2DS5Q14953 304 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 FASTKD3Q14CZ7 662 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 FASTKD1Q53R41 847 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CTSL3PQ5NE16 218 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CASC4Q6P4E1 433 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 BORAQ6PGQ7 559 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 TMEM26Q6ZUK4 368 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 ZNF572Q7Z3I7 529 aaPredicted RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 TICAM1Q8IUC6 712 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 DENND6AQ8IWF6 608 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 LMNTD1Q8N9Z9 388 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 PEX13Q92968 403 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 PMEPA1Q969W9 287 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 BIRC8Q96P09 236 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 ZCCHC2Q9C0B9 1178 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 DPH5Q9H2P9 285 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 XAB2Q9HCS7 855 aaKnown RBP11.12□□□□□ -0.63
TMEM258-205ENST00000540434 GRHL1Q9NZI5 618 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 TUBD1Q9UJT1 453 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CDC23Q9UJX2 597 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 CDYLQ9Y232 598 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
TMEM258-205ENST00000540434 SLC5A10A0PJK1 596 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 OR5K4A6NMS3 321 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 EFCAB8A8MWE9 144 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 C9orf172C9J069 976 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 TMX2-CTNND1H3BSU7 103 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 KCNJ13O60928 360 aa11.11□□□□□ -0.63
TMEM258-205ENST00000540434 URI1O94763 535 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms