RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TBL1YQ9BQ87 522 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SLC6A15Q9H2J7 730 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 AKIP1Q9NQ31 210 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 IFT46Q9NQC8 304 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 OPTCQ9UBM4 332 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 A0A087X1B8 175 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 A0A0A0MRY4 1105 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 OR6C74A6NCV1 312 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 PRSS44E7EML9 344 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 KCNJ13O60928 360 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 C8BP07358 591 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 CAV3P56539 151 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 PTPRCAPQ14761 206 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 NOMO2Q5JPE7 1267 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 STK40Q8N2I9 435 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 ANKK1Q8NFD2 765 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 MZB1Q8WU39 189 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 BCL7CQ8WUZ0 217 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 C11orf24Q96F05 449 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 SPATA13Q96N96 652 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 MRPL57Q9BQC6 102 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 TINAGL1Q9GZM7 467 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 GALNT9Q9HCQ5 603 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 MAGEL2Q9UJ55 1249 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TSPAN16Q9UKR8 245 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TMEM5Q9Y2B1 443 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 NWD1Q149M9 1564 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 NPEPPSL1A6NEC2 478 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CXCR6O00574 342 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SIGLEC5O15389 551 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 MFSD11O43934 449 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 STSP08842 583 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CYP19A1P11511 503 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 CBX5P45973 191 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 PPP3CCP48454 512 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SIGLEC14Q08ET2 396 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TUBB3Q13509 450 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CLINT1Q14677 625 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 GANABQ14697 944 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 UBQLNLQ8IYU4 475 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 KCTD15Q96SI1 283 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 USB1Q9BQ65 265 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 C1QTNF6Q9BXI9 259 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 MBD2Q9UBB5 411 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TBC1D30Q9Y2I9 924 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 HRH3Q9Y5N1 445 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SNX10Q9Y5X0 201 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 A0A1W2PQ09 198 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 H0YCG3 227 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 GRID2O43424 1007 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TPST2O60704 377 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 ZNF250P15622 560 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 CEBPGP53567 150 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 FCGRTP55899 365 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 GFOD2Q3B7J2 385 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 CYB5R2Q6BCY4 276 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 XYLT1Q86Y38 959 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 BEST4Q8NFU0 473 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 MUL1Q969V5 352 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TRAF4Q9BUZ4 470 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 HDHD5Q9BXW7 423 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 CLN6Q9NWW5 311 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 MAB21L2Q9Y586 359 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TTC24A2A3L6 582 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 TOR1AO14656 332 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 MEIS2O14770 477 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 PER2O15055 1255 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 SEC14L2O76054 403 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 PIRTP0C851 137 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 SREBF1P36956 1147 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 GMPSP49915 693 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 GP2P55259 537 aaKnown RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 USP21Q9UK80 565 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TMCC3Q9ULS5 477 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TEX51A0A1B0GUA7 166 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 STOMP27105 288 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 LIMK2P53671 638 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 CRYZQ08257 329 aaKnown RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 ABRQ12979 859 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 BOLA3Q53S33 107 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 MTFR2Q6P444 385 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 ZFP3Q96NJ6 502 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 CGRRF1Q99675 332 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TMED9Q9BVK6 235 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 ZNF302Q9NR11 478 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 PRMT8Q9NR22 394 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 PRMT5O14744 637 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 OR5F1O95221 314 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 BMP2P12643 396 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 C1QTNF8P60827 252 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 NADSYN1Q6IA69 706 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.9□□□□□ -0.66
PBX1-212ENST00000540236 PIM3Q86V86 326 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 ZDHHC21Q8IVQ6 265 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 SLC22A17Q8WUG5 538 aa10.9□□□□□ -0.66
PBX1-212ENST00000540236 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms