RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CAMK2DQ13557 499 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 TNIP1Q15025 636 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF628Q5EBL2 1059 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 RNASEH2BQ5TBB1 312 aaKnown RBP6.25□□□□□ -1.41
TRAV11-201ENST00000539512 DET1Q7L5Y6 550 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 MFN1Q8IWA4 741 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 CFAP206Q8IYR0 622 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 KBTBD3Q8NAB2 608 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 MRPS27Q92552 414 aaKnown RBP6.25□□□□□ -1.41
TRAV11-201ENST00000539512 SPDL1Q96EA4 605 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 STAMBPL1Q96FJ0 436 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 CFAP57Q96MR6 1250 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 OLFM1Q99784 485 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 TRAF4Q9BUZ4 470 aaPredicted RBP6.25□□□□□ -1.41
TRAV11-201ENST00000539512 ERVMER34-1Q9H9K5 563 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 MBNL1Q9NR56 388 aaKnown RBP6.25□□□□□ -1.41
TRAV11-201ENST00000539512 ECHDC1Q9NTX5 307 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 OLAHQ9NV23 265 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF580Q9UK33 172 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 EVPLQ92817 2033 aa6.25□□□□□ -1.41
TRAV11-201ENST00000539512 A0A1W2PRB8 838 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 HEPACAM2A8MVW5 462 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 A8MXE2 369 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 SYNCRIPO60506 623 aaKnown RBP6.24□□□□□ -1.41
TRAV11-201ENST00000539512 NR3C1P04150 777 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 GNAZP19086 355 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CBLP22681 906 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 TPD52P55327 224 aaPredicted RBP6.24□□□□□ -1.41
TRAV11-201ENST00000539512 MDH1BQ5I0G3 518 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CCDC186Q7Z3E2 898 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 LMNTD1Q8N9Z9 388 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 OR5M8Q8NGP6 311 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CCDC107Q8WV48 283 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 ST6GAL2Q96JF0 529 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF354BQ96LW1 612 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CTAGE1Q96RT6 745 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 NUP85Q9BW27 656 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 ZBTB20Q9HC78 741 aaPredicted RBP6.24□□□□□ -1.41
TRAV11-201ENST00000539512 OSER1Q9NX31 292 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 ANAPC5Q9UJX4 755 aa6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CPSF3Q9UKF6 684 aaKnown RBP6.24□□□□□ -1.41
TRAV11-201ENST00000539512 CTAGE9A4FU28 777 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 CTAGE8P0CG41 777 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 EPHA2P29317 976 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 PDX1P52945 283 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 PPP5CP53041 499 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 PTPRCAPQ14761 206 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 CTAGE4Q8IX94 777 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 CRYBG2Q8N1P7 616 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 SLC4A11Q8NBS3 891 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 SLC24A4Q8NFF2 622 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF473Q8WTR7 871 aaKnown RBP6.23□□□□□ -1.41
TRAV11-201ENST00000539512 NSL1Q96IY1 281 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 LMLNQ96KR4 655 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 PKP4Q99569 1192 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 TFB2MQ9H5Q4 396 aaKnown RBP6.23□□□□□ -1.41
TRAV11-201ENST00000539512 WDR35Q9P2L0 1181 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 SLC7A7Q9UM01 511 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 CCL27Q9Y4X3 112 aa6.23□□□□□ -1.41
TRAV11-201ENST00000539512 URADA6NGE7 173 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 H7C0S8 307 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 CLIC2O15247 247 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 EIF5BO60841 1220 aaKnown RBP6.22□□□□□ -1.41
TRAV11-201ENST00000539512 TBX10O75333 385 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 ACP2P11117 423 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 SLC6A6P31641 620 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 NR2C2P49116 596 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 RAD23AP54725 363 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 KRBOX4Q5JUW0 171 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 CCNYL2Q5T2Q4 361 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 ZBTB49Q6ZSB9 765 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 NR2C2APQ86WQ0 139 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF595Q8IYB9 648 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 CPSF7Q8N684 471 aaKnown RBP6.22□□□□□ -1.41
TRAV11-201ENST00000539512 XXYLT1Q8NBI6 393 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 RNF128Q8TEB7 428 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 SGK494Q96LW2 274 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 GPR88Q9GZN0 384 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 ZNF556Q9HAH1 456 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 ACKR4Q9NPB9 350 aa6.22□□□□□ -1.41
TRAV11-201ENST00000539512 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.22□□□□□ -1.41
TRAV11-201ENST00000539512 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.42
TRAV11-201ENST00000539512 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 C5orf60A6NFR6 353 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 XPNPEP2O43895 674 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 TBCAO75347 108 aaKnown RBP6.21□□□□□ -1.42
TRAV11-201ENST00000539512 PRSS1P07477 247 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 SP100P23497 879 aaPredicted RBP6.21□□□□□ -1.42
TRAV11-201ENST00000539512 CX3CL1P78423 397 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 PHEXP78562 749 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 DMP1Q13316 513 aaPredicted RBP6.21□□□□□ -1.42
TRAV11-201ENST00000539512 COG2Q14746 738 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 GRTP1Q5TC63 336 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 RBPMS2Q6ZRY4 209 aaKnown RBP6.21□□□□□ -1.42
TRAV11-201ENST00000539512 C18orf65Q6ZTR6 163 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 SLC26A9Q7LBE3 791 aa6.21□□□□□ -1.42
TRAV11-201ENST00000539512 TRMT1LQ7Z2T5 733 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms