RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TFGQ92734 400 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 AHCYL2Q96HN2 611 aaKnown RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 C9orf72Q96LT7 481 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 CCDC74BQ96LY2 380 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 NDNQ99608 321 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 HGH1Q9BTY7 390 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 MOCS1Q9NZB8 636 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 KLHL3Q9UH77 587 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 SATB2Q9UPW6 733 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 A8MU76 341 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 DUX1O43812 170 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 KIF1CO43896 1103 aaKnown RBP15.34■□□□□ 0.05
RPAIN-206ENST00000539417 SLCO2B1O94956 709 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 ECHS1P30084 290 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CCKBRP32239 447 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CD151P48509 253 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CLCN7P51798 805 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CYP4F3Q08477 520 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 ABRQ12979 859 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 ACSBG2Q5FVE4 666 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 SNAP47Q5SQN1 464 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 TMEM71Q6P5X7 295 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 UNQ6494/PRO21346Q6UXR6 183 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 SIDT2Q8NBJ9 832 aaKnown RBP15.34■□□□□ 0.05
RPAIN-206ENST00000539417 ACVR1CQ8NER5 493 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 TMEM159Q96B96 161 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 XKR8Q9H6D3 395 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 KIR3DX1Q9H7L2 352 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 PPANQ9NQ55 473 aaKnown RBP15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CIDEBQ9UHD4 219 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 PLAGL1Q9UM63 463 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
RPAIN-206ENST00000539417 CXorf49A8MYA2 514 aaPredicted RBP15.33■□□□□ 0.05
RPAIN-206ENST00000539417 C1QAP02745 245 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 THRAP10827 490 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 ITIH1P19827 911 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 CHRM3P20309 590 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 ETV5P41161 510 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 CUL1Q13616 776 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 GBX1Q14549 363 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 FOXR1Q6PIV2 292 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 RBM12BQ8IXT5 1001 aaKnown RBP15.33■□□□□ 0.05
RPAIN-206ENST00000539417 LMNTD2Q8IXW0 634 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 CEP112Q8N8E3 955 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 AVL9Q8NBF6 648 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 OR4D9Q8NGE8 314 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 CFAP61Q8NHU2 1237 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 CALML6Q8TD86 181 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 PYROXD1Q8WU10 500 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 PPM1MQ96MI6 270 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 TGM7Q96PF1 710 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 PANX3Q96QZ0 392 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 AARSD1Q9BTE6 412 aaKnown RBP15.33■□□□□ 0.05
RPAIN-206ENST00000539417 PDP2Q9P2J9 529 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 ZFHX4Q86UP3 3567 aa15.33■□□□□ 0.05
RPAIN-206ENST00000539417 ZZEF1O43149 2961 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 IFRD1O00458 451 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 NDC80O14777 642 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CAPN5O15484 640 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 APOA4P06727 396 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CCL4P13236 92 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 AMD1P17707 334 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 MAGEA4P43358 317 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CAPZBP47756 277 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CDKN2DP55273 166 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 GABREP78334 506 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CAV1Q03135 178 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 FRG1Q14331 258 aaKnown RBP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 RTP5Q14D33 572 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 PLCL1Q15111 1095 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 CCSMST1Q4G0I0 132 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 OTOAQ7RTW8 1153 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 OR4E2Q8NGC2 313 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 OR52E1Q8NGJ3 308 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 ASZ1Q8WWH4 475 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 LIN37Q96GY3 246 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-206ENST00000539417 TMEM74Q96NL1 305 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 GPR21Q99679 349 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 TSSK1BQ9BXA7 367 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 NRSN2Q9GZP1 204 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 L2HGDHQ9H9P8 463 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 LATS2Q9NRM7 1088 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 ICKQ9UPZ9 632 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 ASF1AQ9Y294 204 aa15.33■□□□□ 0.04
RPAIN-206ENST00000539417 IGF2RP11717 2491 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 MN1Q10571 1320 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-206ENST00000539417 LAMA5O15230 3695 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 CCDC187A0A096LP49 1063 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 OR6C74A6NCV1 312 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 TAF4O00268 1085 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 BTN3A3O00478 584 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 BRINP1O60477 761 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 MGAT5Q09328 741 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 GRB7Q14451 532 aa15.32■□□□□ 0.04
RPAIN-206ENST00000539417 KRT33BQ14525 404 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms