RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 ASCL5Q7RTU5 278 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 EDEM2Q9BV94 578 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 DERL2Q9GZP9 239 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 PCMTD2Q9NV79 361 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 TSR3Q9UJK0 312 aaKnown RBP23.69■■□□□ 1.38
HMGA2-208ENST00000537429 OTOGLQ3ZCN5 2332 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 FFAR2O15552 330 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 COL6A2P12110 1019 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 KRT4P19013 534 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 CCNFP41002 786 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 HALP42357 657 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 IYDQ6PHW0 289 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 PRR23CQ6ZRP0 262 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 CLEC14AQ86T13 490 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 NAGSQ8N159 534 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 MYO1HQ8N1T3 1032 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 PLD6Q8N2A8 252 aaKnown RBP23.69■■□□□ 1.38
HMGA2-208ENST00000537429 SPATA6LQ8N4H0 392 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 KCTD4Q8WVF5 259 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 PKNOX2Q96KN3 472 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 INSM2Q96T92 566 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-208ENST00000537429 ACBD3Q9H3P7 528 aa23.69■■□□□ 1.38
HMGA2-208ENST00000537429 ARHGEF17Q96PE2 2063 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 IFRD1O00458 451 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 CDX4O14627 284 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 LTA4HP09960 611 aaKnown RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 SLC18A2Q05940 514 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 ABRQ12979 859 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 RASGRP3Q8IV61 690 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 SRRM1Q8IYB3 904 aaKnown RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 ZDHHC1Q8WTX9 485 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 SKA2Q8WVK7 121 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 TFGQ92734 400 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 NXNL1Q96CM4 212 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 C12orf66Q96MD2 445 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 RXFP3Q9NSD7 469 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 IGSF5Q9NSI5 407 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 SENP1Q9P0U3 644 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 RUVBL2Q9Y230 463 aaKnown RBP23.68■■□□□ 1.38
HMGA2-208ENST00000537429 CABIN1Q9Y6J0 2220 aa23.68■■□□□ 1.38
HMGA2-208ENST00000537429 OR5K4A6NMS3 321 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 OPA1O60313 960 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 KLHL2O95198 593 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 CD1DP15813 335 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 RPE65Q16518 533 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 OGFOD3Q6PK18 319 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 EXOC3L1Q86VI1 746 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 SFTPA2Q8IWL1 248 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 C4orf33Q8N1A6 199 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 ASB11Q8WXH4 323 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 STMN4Q9H169 189 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-208ENST00000537429 TMEM9BQ9NQ34 198 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 NLGN3Q9NZ94 848 aa23.67■■□□□ 1.38
HMGA2-208ENST00000537429 ZNF624Q9P2J8 865 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-208ENST00000537429 CFAP20Q9Y6A4 193 aaKnown RBP23.67■■□□□ 1.38
HMGA2-208ENST00000537429 OR52A4PA6NMU1 304 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 GFYI3L273 518 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 TOP3BO95985 862 aaKnown RBP23.66■■□□□ 1.38
HMGA2-208ENST00000537429 SLC2A4P14672 509 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 ATP6V0D1P61421 351 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 FAM83EQ2M2I3 478 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 C6orf132Q5T0Z8 1188 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 DBX2Q6ZNG2 339 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 SFRP1Q8N474 314 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 PATE1Q8WXA2 126 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 ARL8AQ96BM9 186 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 GPR78Q96P69 363 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 UNKQ9C0B0 810 aaKnown RBP23.66■■□□□ 1.38
HMGA2-208ENST00000537429 NMRAL1Q9HBL8 299 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 ZNF358Q9NW07 568 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 IKZF3Q9UKT9 509 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 PCDHGB2Q9Y5G2 931 aa23.66■■□□□ 1.38
HMGA2-208ENST00000537429 KIR2DS5A0A0G2JLQ3 304 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 A0A0G2JNG1 304 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 B4DGG1 531 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 KIR2DS3K7RE56 304 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 ZBTB14O43829 449 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 FOXD2O60548 495 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 PSIP1O75475 530 aaKnown RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 MAPK9P45984 424 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 KIR2DS5Q14953 304 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 SUZ12Q15022 739 aaKnown RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 AGBL2Q5U5Z8 902 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 UNC5DQ6UXZ4 953 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 LCA5Q86VQ0 697 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 C17orf82Q86X59 251 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 CFAP61Q8NHU2 1237 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 TLCD1Q96CP7 247 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 FOPNLQ96NB1 174 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 DUSP23Q9BVJ7 150 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 IMP3Q9NV31 184 aaKnown RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 SIRPGQ9P1W8 387 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 NOVA2Q9UNW9 492 aaKnown RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 ASF1AQ9Y294 204 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 ACTL7BQ9Y614 415 aa23.65■■□□□ 1.38
HMGA2-208ENST00000537429 EP300Q09472 2414 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-208ENST00000537429 TRBV23OR9-2A0A075B6M9 112 aa23.64■■□□□ 1.38
HMGA2-208ENST00000537429 NOBOXO60393 691 aa23.64■■□□□ 1.38
HMGA2-208ENST00000537429 ALPPL2P10696 532 aa23.64■■□□□ 1.38
HMGA2-208ENST00000537429 MTHFD1P11586 935 aaKnown RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms