RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 MAP7Q14244 749 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 KCTD19Q17RG1 926 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 MANEAQ5SRI9 462 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 ANKRD22Q5VYY1 191 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 CYB5D1Q6P9G0 228 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 PCSK4Q6UW60 755 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 GRK7Q8WTQ7 553 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 ELMO1Q92556 727 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 MFSD3Q96ES6 412 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 FERD3LQ96RJ6 166 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 MAP3K3Q99759 626 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 TWSG1Q9GZX9 223 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 P2RY12Q9H244 342 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
SFSWAP-205ENST00000537164 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 MAGEB16A2A368 324 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 PRMT5O14744 637 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 ZNF185O15231 689 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 RAD1O60671 282 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 AVILO75366 819 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 GPC4O75487 556 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 STK17BO94768 372 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 RPS3P23396 243 aaKnown RBP eCLIP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 MAP4P27816 1152 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 ARCN1P48444 511 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 VPS41P49754 854 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 KRT33BQ14525 404 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 DNTTIP2Q5QJE6 756 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 PAPD7Q5XG87 772 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 KIAA0930Q6ICG6 404 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 TIPARPQ7Z3E1 657 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 BPHLQ86WA6 291 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 LRRC6Q86X45 466 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 TBC1D21Q8IYX1 336 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 CACNA2D3Q8IZS8 1091 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 D2HGDHQ8N465 521 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 OR4E2Q8NGC2 313 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 OR52E1Q8NGJ3 308 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 LCN9Q8WX39 176 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 TTC9Q92623 222 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 FCRL4Q96PJ5 515 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 OR6C1Q96RD1 312 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 TSSK1BQ9BXA7 367 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 TRIT1Q9H3H1 467 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 SRMSQ9H3Y6 488 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 POMT2Q9UKY4 750 aa16.72■□□□□ 0.27
SFSWAP-205ENST00000537164 FAM237BA0A1B0GVD1 139 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 CCR7P32248 378 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 KPNA2P52292 529 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 ADARP55265 1226 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 HSD11B2P80365 405 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 FOXM1Q08050 763 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 ABHD18Q0P651 414 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 TYSND1Q2T9J0 566 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 LDB1Q86U70 411 aaPredicted RBP16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 VASH2Q86V25 355 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 SLC22A15Q8IZD6 547 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 NLGN4XQ8N0W4 816 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 NAT8LQ8N9F0 302 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 PHC3Q8NDX5 983 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 NLGN4YQ8NFZ3 816 aaPredicted RBP16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 OR5K2Q8NHB8 316 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 ASZ1Q8WWH4 475 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 SERPINB12Q96P63 405 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 TCF12Q99081 682 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 C1GALT1Q9NS00 363 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 PCYOX1Q9UHG3 505 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 POLG2Q9UHN1 485 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 BTRCQ9Y297 605 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 PCDHGA4Q9Y5G9 962 aa16.71■□□□□ 0.27
SFSWAP-205ENST00000537164 UBA6A0AVT1 1052 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 SDR42E2A6NKP2 422 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 SLCO2B1O94956 709 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 VAPBO95292 243 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 ZBTB11O95625 1053 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 MSL3P1P0C860 447 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 FOLR1P15328 257 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 POLR2CP19387 275 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 WT1P19544 449 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 AOAHP28039 575 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 PRKAA1Q13131 559 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 MRNIPQ6NTE8 343 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 ARMC6Q6NXE6 501 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 TMEM135Q86UB9 458 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 AMIGO1Q86WK6 493 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 ADGRF3Q8IZF5 1079 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 IL22RA1Q8N6P7 574 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 SIDT2Q8NBJ9 832 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 OR5AR1Q8NGP9 310 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 PITPNM3Q9BZ71 974 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 ASF1AQ9Y294 204 aa16.7■□□□□ 0.26
SFSWAP-205ENST00000537164 BTN3A3O00478 584 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 BTN3A1O00481 513 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 ITGB2P05107 769 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 TPBGLP0DKB5 382 aa16.69■□□□□ 0.26
SFSWAP-205ENST00000537164 PRDX3P30048 256 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms