RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PRMT5O14744 637 aaPredicted RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 TP73O15350 636 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 BANF1O75531 89 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 SEC31AO94979 1220 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 GSTM1P09488 218 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 LIPCP11150 499 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 MTHFD1P11586 935 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 ITGB6P18564 788 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 PDHA2P29803 388 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 CSF2RBP32927 897 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 CSRP3P50461 194 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 ITGA8P53708 1063 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 GSTM4Q03013 218 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 DHX9Q08211 1270 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 GPR18Q14330 331 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 BRD3Q15059 726 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 MSS51Q4VC12 460 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 MANEAQ5SRI9 462 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 CAPRIN2Q6IMN6 1127 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 MRNIPQ6NTE8 343 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 NEPROQ6NW34 567 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 TMEM71Q6P5X7 295 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 ZNF449Q6P9G9 518 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 NAPRTQ6XQN6 538 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 MAATS1Q7Z4T9 603 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 RBM12BQ8IXT5 1001 aaKnown RBP17.54■□□□□ 0.4
CCDC61-201ENST00000536603 OR4D9Q8NGE8 314 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 GPR150Q8NGU9 434 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 ELMO1Q92556 727 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 STAMBPL1Q96FJ0 436 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 SNF8Q96H20 258 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 RMDN2Q96LZ7 410 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 OR52A5Q9H2C5 316 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 TMEM9Q9P0T7 183 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 SNX24Q9Y343 169 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 LOXL2Q9Y4K0 774 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 PCDHB11Q9Y5F2 797 aa17.54■□□□□ 0.4
CCDC61-201ENST00000536603 IGHV5-10-1A0A0J9YXX1 117 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 ZCWPW2A0A1B0GU75 182 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 CYSRT1A8MQ03 144 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 IQCF5A8MTL0 148 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 F8W8V4 182 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 USP1O94782 785 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 TYRP1P17643 537 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 RPL21P46778 160 aaKnown RBP17.53■□□□□ 0.4
CCDC61-201ENST00000536603 PREPP48147 710 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 MAPK10P53779 464 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 RPA4Q13156 261 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 LINC00303Q3SY05 128 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 BBS9Q3SYG4 887 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 DNAJC21Q5F1R6 531 aaKnown RBP17.53■□□□□ 0.4
CCDC61-201ENST00000536603 DUPD1Q68J44 220 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 C8orf74Q6P047 294 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 DUS1LQ6P1R4 473 aaKnown RBP17.53■□□□□ 0.4
CCDC61-201ENST00000536603 JPH3Q8WXH2 748 aaPredicted RBP17.53■□□□□ 0.4
CCDC61-201ENST00000536603 PWWP2AQ96N64 755 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 DPYSL5Q9BPU6 564 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 ERP44Q9BS26 406 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 IL17BQ9UHF5 180 aa17.53■□□□□ 0.4
CCDC61-201ENST00000536603 MYO18BQ8IUG5 2567 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 UBA6A0AVT1 1052 aaPredicted RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 SMAPO00193 183 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 IFRD1O00458 451 aaPredicted RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 LIN7AO14910 233 aaPredicted RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 PFDN6O15212 129 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 NVLO15381 856 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 UBXN7O94888 489 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 ITGB2P05107 769 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 AMD1P17707 334 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 PGAM1P18669 254 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 ITIH1P19827 911 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 LIMK2P53671 638 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 SRSF6Q13247 344 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 THOC5Q13769 683 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 BOP1Q14137 746 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 KRT33BQ14525 404 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 SNAP47Q5SQN1 464 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 PTRHD1Q6GMV3 140 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 WDR74Q6RFH5 385 aaPredicted RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 PDIK1LQ8N165 341 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 KRT222Q8N1A0 295 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 RCBTB1Q8NDN9 531 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 CCDC74BQ96LY2 380 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 EBNA1BP2Q99848 306 aaKnown RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 P2RY12Q9H244 342 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 DPH5Q9H2P9 285 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 C20orf96Q9NUD7 363 aaPredicted RBP17.52■□□□□ 0.4
CCDC61-201ENST00000536603 OGFRQ9NZT2 677 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 FAM169AQ9Y6X4 670 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 COLEC10Q9Y6Z7 277 aa17.52■□□□□ 0.4
CCDC61-201ENST00000536603 ESYT3A0FGR9 886 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 SLC5A10A0PJK1 596 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 PRAMEF10O60809 474 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 RHOXF2BP0C7M4 288 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 FAM87AP0C7U9 286 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 SFTPCP11686 197 aa17.51■□□□□ 0.39
CCDC61-201ENST00000536603 OGNP20774 298 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms