RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FTH1P02794 183 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 PDHA2P29803 388 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 PREPP48147 710 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 TUBB4BP68371 445 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 TUBB2AQ13885 445 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 ERV3-1Q14264 604 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 ITIH4Q14624 930 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 MEI1Q5TIA1 1274 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 LYPLAL1Q5VWZ2 237 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 FBXO38Q6PIJ6 1188 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 ATG14Q6ZNE5 492 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 TFGQ92734 400 aaPredicted RBP15.02■□□□□ -0
CPSF1-211ENST00000533492 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 FANCEQ9HB96 536 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 C1GALT1Q9NS00 363 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 PAK5Q9P286 719 aa15.02■□□□□ -0
CPSF1-211ENST00000533492 PIPSLA2A3N6 862 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 SLC9B1P1A6NJY1 282 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 F8W8V4 182 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 LIN7AO14910 233 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-211ENST00000533492 SCRG1O75711 98 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 SUN1O94901 812 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 OR56A5P0C7T3 313 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 ETS1P14921 441 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 ADRA1DP25100 572 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 PSMA3P25788 255 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 FOXN2P32314 431 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 PRKG2Q13237 762 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 DNASE1L3Q13609 305 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 BRD3Q15059 726 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 GPR19Q15760 415 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 ATP1A1-AS1Q5TC04 95 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 NLRP9Q7RTR0 991 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 AMIGO1Q86WK6 493 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 TMEM126BQ8IUX1 230 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 OR52E1Q8NGJ3 308 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 OR6P1Q8NGX9 317 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 OR8K5Q8NH50 307 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 CT55Q8WUE5 264 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 ELMO1Q92556 727 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 HDAC10Q969S8 669 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 PPM1MQ96MI6 270 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 HGH1Q9BTY7 390 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 TFB2MQ9H5Q4 396 aaKnown RBP15.01□□□□□ -0.01
CPSF1-211ENST00000533492 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 POMT2Q9UKY4 750 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 BTRCQ9Y297 605 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 PRSS21Q9Y6M0 314 aa15.01□□□□□ -0.01
CPSF1-211ENST00000533492 TLN1Q9Y490 2541 aaKnown RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 BOD1L1Q8NFC6 3051 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 C21orf140B9A014 251 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PYCARD-AS1I3L0S3 204 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 BTN3A3O00478 584 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 SUV39H1O43463 412 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 CPNE3O75131 537 aaKnown RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 CREG1O75629 220 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 APRTP07741 180 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 CCDC175P0C221 793 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PRDX3P30048 256 aaKnown RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 PPARGP37231 505 aaPredicted RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 GRIA1P42261 906 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PRAMEP78395 509 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PLOD1Q02809 727 aaPredicted RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 KCNC4Q03721 635 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 SEMA5AQ13591 1074 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 CCNG2Q16589 344 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 ZNF658BQ4V348 819 aaPredicted RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 SYTL3Q4VX76 610 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 TSTD2Q5T7W7 516 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 AFTPHQ6ULP2 937 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PACS1Q6VY07 963 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PRUNE1Q86TP1 453 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 HOOK3Q86VS8 718 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PTRH1Q86Y79 214 aaKnown RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 C9orf43Q8TAL5 461 aaPredicted RBP15□□□□□ -0.01
CPSF1-211ENST00000533492 RANBP9Q96S59 729 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 TLR10Q9BXR5 811 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 TWSG1Q9GZX9 223 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 ANAPC5Q9UJX4 755 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 RIMKLBQ9ULI2 386 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 POLHQ9Y253 713 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 ASF1AQ9Y294 204 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 PCDHGA6Q9Y5G7 932 aa15□□□□□ -0.01
CPSF1-211ENST00000533492 CDC14CA4D256 554 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 C2orf74A8MZ97 194 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 BTN3A1O00481 513 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 TERTO14746 1132 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 GOT2P00505 430 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 KLK3P07288 261 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 RPS15P62841 145 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 BOP1Q14137 746 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 FASTKD1Q53R41 847 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 FAM199XQ6PEV8 388 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 GSTA5Q7RTV2 222 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 PPHLN1Q8NEY8 458 aaKnown RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 OR13J1Q8NGT2 312 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 OR4L1Q8NH43 312 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 MR1Q95460 341 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms