RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 WDR83Q9BRX9 315 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 TRIM31Q9BZY9 425 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 PLAC1Q9HBJ0 212 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 SEMA5BQ9P283 1151 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 CDC23Q9UJX2 597 aa19.92■□□□□ 0.78
CCS-208ENST00000533244 DSPP15924 2871 aaKnown RBP19.92■□□□□ 0.78
CCS-208ENST00000533244 UBA6A0AVT1 1052 aaPredicted RBP19.91■□□□□ 0.78
CCS-208ENST00000533244 OR5K3A6NET4 321 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 B4E171 279 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 TTC4O95801 387 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 S1PR4O95977 384 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 ESR1P03372 595 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 TSPAN7P41732 249 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 EIF3BP55884 814 aaKnown RBP19.91■□□□□ 0.78
CCS-208ENST00000533244 BBS9Q3SYG4 887 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 ZNF789Q5FWF6 425 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 SNAP47Q5SQN1 464 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 VRK3Q8IV63 474 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 IGDCC3Q8IVU1 814 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 PHC3Q8NDX5 983 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 LRRC39Q96DD0 335 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 ZDHHC12Q96GR4 267 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 PWWP2AQ96N64 755 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 TGM7Q96PF1 710 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 FERD3LQ96RJ6 166 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 ERP44Q9BS26 406 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 TFB2MQ9H5Q4 396 aaKnown RBP19.91■□□□□ 0.78
CCS-208ENST00000533244 C20orf96Q9NUD7 363 aaPredicted RBP19.91■□□□□ 0.78
CCS-208ENST00000533244 KLHL3Q9UH77 587 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 VPS9D1Q9Y2B5 631 aa19.91■□□□□ 0.78
CCS-208ENST00000533244 A8MU76 341 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 C9orf172C9J069 976 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 H3BMM5 538 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 AGRPO00253 132 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 NDC80O14777 642 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 SLCO2B1O94956 709 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 APOA4P06727 396 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 SLC5A2P31639 672 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 PPP1CAP62136 330 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 MRPS25P82663 173 aaKnown RBP19.9■□□□□ 0.78
CCS-208ENST00000533244 HSPA14Q0VDF9 509 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 THOC5Q13769 683 aaKnown RBP19.9■□□□□ 0.78
CCS-208ENST00000533244 KRT33BQ14525 404 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 HIF1AQ16665 826 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 SPANXN3Q5MJ09 141 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 DENND6AQ8IWF6 608 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 ZNF248Q8NDW4 579 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 CALML6Q8TD86 181 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 ZNF768Q9H5H4 540 aaKnown RBP19.9■□□□□ 0.78
CCS-208ENST00000533244 OCIAD1Q9NX40 245 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 SIDT1Q9NXL6 827 aaKnown RBP19.9■□□□□ 0.78
CCS-208ENST00000533244 SNX24Q9Y343 169 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 PCDHGA3Q9Y5H0 932 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 TEX264Q9Y6I9 313 aa19.9■□□□□ 0.78
CCS-208ENST00000533244 AHCTF1Q8WYP5 2266 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 E7ESA3 106 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 KIF1CO43896 1103 aaKnown RBP19.89■□□□□ 0.77
CCS-208ENST00000533244 FMO4P31512 558 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 SLC1A2P43004 574 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 MAPK10P53779 464 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 GBX1Q14549 363 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 TMED2Q15363 201 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 DUPD1Q68J44 220 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 OOSP2Q86WS3 158 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 TBC1D21Q8IYX1 336 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 UNC5BQ8IZJ1 945 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 BBOF1Q8ND07 529 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 OR52E1Q8NGJ3 308 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 OR5AR1Q8NGP9 310 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 OR5K2Q8NHB8 316 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 KLHL6Q8WZ60 621 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 USP7Q93009 1102 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 CD180Q99467 661 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 FAM167BQ9BTA0 163 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 HGH1Q9BTY7 390 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 TWSG1Q9GZX9 223 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 LATS2Q9NRM7 1088 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 HRASLS2Q9NWW9 162 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 ASF1AQ9Y294 204 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 CRYL1Q9Y2S2 319 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 ADAMTS20P59510 1910 aa19.89■□□□□ 0.77
CCS-208ENST00000533244 EFCAB7A8K855 629 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 KPNA5O15131 536 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 PRAMEF10O60809 474 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 NIPSNAP2O75323 286 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 TUBB4AP04350 444 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 PKMP14618 531 aaKnown RBP19.88■□□□□ 0.77
CCS-208ENST00000533244 ELK3P41970 407 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 CSE1LP55060 971 aaKnown RBP19.88■□□□□ 0.77
CCS-208ENST00000533244 ARL4CP56559 192 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 MC2RQ01718 297 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 CKAP4Q07065 602 aaKnown RBP19.88■□□□□ 0.77
CCS-208ENST00000533244 CTBP1Q13363 440 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 HSP90AA5PQ58FG0 334 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 PLEKHS1Q5SXH7 462 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 STEAP4Q687X5 459 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 IRGCQ6NXR0 463 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 KCNMB4Q86W47 210 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 LCN9Q8WX39 176 aa19.88■□□□□ 0.77
CCS-208ENST00000533244 PMEPA1Q969W9 287 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms