RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NUDCD1Q96RS6 583 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 TUBGCP5Q96RT8 1024 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 TEX101Q9BY14 249 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ING2Q9H160 280 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 EPB41L1Q9H4G0 881 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 STN1Q9H668 368 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 PIH1D1Q9NWS0 290 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 KCTD5Q9NXV2 234 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 LUZP4Q9P127 313 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 TNRC6AQ8NDV7 1962 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 CSMD1Q96PZ7 3565 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 MAP2K7O14733 419 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 RIPK2O43353 540 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ATP8B1O43520 1251 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 KIAA0754O94854 1291 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 TTC4O95801 387 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 MGAT1P26572 445 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ELK3P41970 407 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 MAGEA3P43357 314 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CSNK1DP48730 415 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 EPHA4P54764 986 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 POLR2LP62875 67 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 RALGDSQ12967 914 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACOX1Q15067 660 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 UBAP2Q5T6F2 1119 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ALS2CLQ60I27 953 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC6A19Q695T7 634 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 DENND5AQ6IQ26 1287 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 PLXDC1Q8IUK5 500 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 IQCKQ8N0W5 287 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SFRP1Q8N474 314 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 DNAAF3Q8N9W5 541 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC37A2Q8TED4 501 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 C19orf60Q96EN9 201 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 GPR87Q9BY21 358 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 EPB41L4BQ9H329 900 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CDC42EP4Q9H3Q1 356 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACTL8Q9H568 366 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SIDT1Q9NXL6 827 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 BFARQ9NZS9 450 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC17A4Q9Y2C5 497 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 TEX264Q9Y6I9 313 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 LOC285095A0A1B0GVY8 99 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 AP3B1O00203 1094 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SASH3O75995 380 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACSL3O95573 720 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 IVLP07476 585 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SERPINA4P29622 427 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CHRNA4P43681 627 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 HHEXQ03014 270 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CDK18Q07002 472 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CDH17Q12864 832 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC14A2Q15849 920 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 RALGPS1Q5JS13 557 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CPZQ66K79 652 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CAMK1DQ8IU85 385 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 MPP5Q8N3R9 675 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC25A41Q8N5S1 370 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 PAF1Q8N7H5 531 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 NUS1Q96E22 293 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 TTC25Q96NG3 672 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 EBNA1BP2Q99848 306 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 LHX9Q9NQ69 397 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 LNPEPQ9UIQ6 1025 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 MAD1L1Q9Y6D9 718 aa11.09□□□□□ -0.63
TRAPPC4-213ENST00000533149 TRBV23OR9-2A0A075B6M9 112 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 ARGFXA6NJG6 315 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 TOX3O15405 576 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 CEACAM4O75871 244 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 CPP00450 1065 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 EPOP01588 193 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 GM2AP17900 193 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 ITGA3P26006 1051 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 MAPK9P45984 424 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 ITGA1P56199 1179 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 GPX6P59796 221 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 AP1S1P61966 158 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 CRADDP78560 199 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 CDK3Q00526 305 aa11.08□□□□□ -0.64
TRAPPC4-213ENST00000533149 CHAF1BQ13112 559 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms