RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR1I1O60431 355 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 C1QL1O75973 258 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 ZBTB11O95625 1053 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-204ENST00000532550 FOLR1P15328 257 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 ZNF28P17035 718 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 ARCN1P48444 511 aaKnown RBP16.76■□□□□ 0.27
PHRF1-204ENST00000532550 PRKG2Q13237 762 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 TUBB3Q13509 450 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 TBR1Q16650 682 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 LINC00303Q3SY05 128 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 AARS2Q5JTZ9 985 aaKnown RBP16.76■□□□□ 0.27
PHRF1-204ENST00000532550 CARFQ8N187 725 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 PRELID2Q8N945 189 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 GALNT6Q8NCL4 622 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 RNF31Q96EP0 1072 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 STAMBPL1Q96FJ0 436 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 SGSM3Q96HU1 749 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 SLC45A3Q96JT2 553 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 FCRL4Q96PJ5 515 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 TSSK1BQ9BXA7 367 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 LNPEPQ9UIQ6 1025 aa16.76■□□□□ 0.27
PHRF1-204ENST00000532550 GSAPA4D1B5 854 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 GOLGA6L3A6NEY3 463 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 ZSCAN12O43309 604 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 MT-ND3P03897 115 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 EBLN1P0CF75 366 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 CDH3P22223 829 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 KPNA2P52292 529 aaKnown RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 SARNPP82979 210 aaKnown RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 CDK16Q00536 496 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 BOP1Q14137 746 aaKnown RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 KCNAB1Q14722 419 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 TRIP13Q15645 432 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 SYTL3Q4VX76 610 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 ZNF534Q76KX8 674 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 ZNF605Q86T29 641 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 AMIGO1Q86WK6 493 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 D2HGDHQ8N465 521 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 OR52E1Q8NGJ3 308 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-204ENST00000532550 SEMA4CQ9C0C4 833 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 FGF21Q9NSA1 209 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 CATSPERZQ9NTU4 200 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 SOHLH2Q9NX45 425 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 PADI1Q9ULC6 663 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 ASF1AQ9Y294 204 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 RPS6KL1Q9Y6S9 549 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 KALRNO60229 2985 aa16.75■□□□□ 0.27
PHRF1-204ENST00000532550 CD3EAPO15446 510 aaKnown RBP16.74■□□□□ 0.27
PHRF1-204ENST00000532550 NKX2-8O15522 239 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 MAP3K7O43318 606 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 TPSB2P20231 275 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 PRDX3P30048 256 aaKnown RBP16.74■□□□□ 0.27
PHRF1-204ENST00000532550 STAT5AP42229 794 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 TTPAP49638 278 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 TERF1P54274 439 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 CRADDP78560 199 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 MC1RQ01726 317 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 TPSAB1Q15661 275 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 LRRC8BQ6P9F7 803 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 NAPRTQ6XQN6 538 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 RASGEF1CQ8N431 466 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 EXD3Q8N9H8 876 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 HGH1Q9BTY7 390 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 C1GALT1Q9NS00 363 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 POLG2Q9UHN1 485 aa16.74■□□□□ 0.27
PHRF1-204ENST00000532550 TTC7AQ9ULT0 858 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-204ENST00000532550 SLC5A10A0PJK1 596 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 SLC9B1P1A6NJY1 282 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 BTN3A3O00478 584 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 KRT14P02533 472 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 SFTPCP11686 197 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 ITGB6P18564 788 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 MGAT1P26572 445 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 ACADLP28330 430 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 DLSTP36957 453 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 VPS41P49754 854 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 TUBB4BP68371 445 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 GPS1Q13098 491 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 TUBB2AQ13885 445 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 SEMA3AQ14563 771 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 PWWP2BQ6NUJ5 590 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 BORAQ6PGQ7 559 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 LDB1Q86U70 411 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-204ENST00000532550 TBC1D21Q8IYX1 336 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 OR5AR1Q8NGP9 310 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 OR8K5Q8NH50 307 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 MS4A14Q96JA4 679 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 CATSPER2Q96P56 530 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 TUBB2BQ9BVA1 445 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 CARD6Q9BX69 1037 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 XKR8Q9H6D3 395 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 KCND1Q9NSA2 647 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 TREX1Q9NSU2 369 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 IL17BQ9UHF5 180 aa16.73■□□□□ 0.27
PHRF1-204ENST00000532550 POMT2Q9UKY4 750 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms