RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RAB40ALP0C0E4 278 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PVRP15151 417 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 CYP2A7P20853 494 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PSMB4P28070 264 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 NDUFS1P28331 727 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PREPP48147 710 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PRLHRP49683 370 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PTCHD3Q3KNS1 767 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 JMJD6Q6NYC1 403 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 RANBP10Q6VN20 620 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 SYTL1Q8IYJ3 562 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 Q8NA96 180 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 ACVR1CQ8NER5 493 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 HM13Q8TCT9 377 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 ACTR5Q9H9F9 607 aaPredicted RBP17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 ZNF451Q9Y4E5 1061 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 HEBP2Q9Y5Z4 205 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 PCM1Q15154 2024 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 C5orf60A6NFR6 353 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 AGAP14A8MT82 685 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 RALBP11234 206 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 PRDX3P30048 256 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 HADHBP55084 474 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 MSLNQ13421 630 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 RAPSNQ13702 412 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 INPP5JQ15735 1006 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 ITPRIPL1Q6GPH6 555 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 BBS12Q6ZW61 710 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 NXPE1Q8N323 547 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 ZBTB2Q8N680 514 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 PHC3Q8NDX5 983 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 SSC4DQ8WTU2 575 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 RBM41Q96IZ5 413 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 FAM118BQ9BPY3 351 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 CCM2Q9BSQ5 444 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 MAP10Q9P2G4 905 aa17.88■□□□□ 0.45
SSSCA1-206ENST00000531405 MACROD2A1Z1Q3 448 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 APOC4-APOC2K7ER74 178 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 APOC2P02655 101 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 PYGMP11217 842 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ATP1B2P14415 290 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 PDHA2P29803 388 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 MAGEA1P43355 309 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 CDKN1CP49918 316 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 VAV2P52735 878 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ZNF140P52738 457 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 MRPL49Q13405 166 aaKnown RBP17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ATP1A4Q13733 1029 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ANKRD20A2Q5SQ80 823 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ANKRD20A1Q5TYW2 823 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ANKRD20A3Q5VUR7 823 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 RBMXL3Q8N7X1 1067 aaKnown RBP17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 OR52E1Q8NGJ3 308 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 ULK4Q96C45 1275 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 COPS8Q99627 209 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 SLC7A5P2Q9GIP4 190 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 OR52A5Q9H2C5 316 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 XKR8Q9H6D3 395 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 COG4Q9H9E3 785 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 LRBAP50851 2863 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 DOPEY1Q5JWR5 2465 aa17.87■□□□□ 0.45
SSSCA1-206ENST00000531405 TCP11X1B4DZS4 312 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 MATN2O00339 956 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 DPM1O60762 260 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 PRSS56P0CW18 603 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 ITGALP20701 1170 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 OTUD4Q01804 1114 aaKnown RBP17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 PRKG2Q13237 762 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 SPARCL1Q14515 664 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 NCF4Q15080 339 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 ZNF658BQ4V348 819 aaPredicted RBP17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 CCDC181Q5TID7 509 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 SLC6A19Q695T7 634 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 CDHR3Q6ZTQ4 885 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 SNX20Q7Z614 316 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 ACTL9Q8TC94 416 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 TRAPPC9Q96Q05 1148 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 HGH1Q9BTY7 390 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 PITPNM3Q9BZ71 974 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 SLAMF7Q9NQ25 335 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 AAR2Q9Y312 384 aaKnown RBP17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 PCDHGB7Q9Y5F8 929 aa17.86■□□□□ 0.45
SSSCA1-206ENST00000531405 A1L4Q6 167 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 CFAP99D6REC4 459 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 ZNF749O43361 778 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 CRTAMO95727 393 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 MSL3P1P0C860 447 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 MC4RP32245 332 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 EIF2S3LQ2VIR3 472 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 DENND5AQ6IQ26 1287 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 TRIM73Q86UV7 250 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 CNGA4Q8IV77 575 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 CCDC110Q8TBZ0 833 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 TBL1YQ9BQ87 522 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 TFB2MQ9H5Q4 396 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 CASS4Q9NQ75 786 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 GPR83Q9NYM4 423 aa17.85■□□□□ 0.45
SSSCA1-206ENST00000531405 SERTAD3Q9UJW9 196 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 648.5 ms