RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CPNE9Q8IYJ1 553 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 HAVCR1Q96D42 359 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 DGCR14Q96DF8 476 aaKnown RBP8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CIB1Q99828 191 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 ERVK-6Q9BXR3 956 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 TIMMDC1Q9NPL8 285 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 FNIP2Q9P278 1114 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 PDCD5O14737 125 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 PGRP06401 933 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CBSLP0DN79 551 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CPN2P22792 545 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CBSP35520 551 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 MSX2P35548 267 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-227ENST00000530748 SCNN1AP37088 669 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 MNDAP41218 407 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CCR8P51685 355 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 NCBP2P52298 156 aaKnown RBP eCLIP8.35□□□□□ -1.078e-20■□□□□ 11.1
CTNND1-227ENST00000530748 NFKB2Q00653 900 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 FPGSQ05932 587 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 SOWAHAQ2M3V2 549 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 RNASE12Q5GAN4 147 aaKnown RBP8.35□□□□□ -1.07
CTNND1-227ENST00000530748 CNKSR3Q6P9H4 555 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 GDPD4Q6W3E5 623 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 IFNL1Q8IU54 200 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 IQCKQ8N0W5 287 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 OXR1Q8N573 874 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 PCDH19Q8TAB3 1148 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 GPR88Q9GZN0 384 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 THUMPD1Q9NXG2 353 aaKnown RBP8.35□□□□□ -1.07
CTNND1-227ENST00000530748 ATXN10Q9UBB4 475 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 ITGB1BP2Q9UKP3 347 aa8.35□□□□□ -1.07
CTNND1-227ENST00000530748 PRORSD1PA6NEY8 169 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SLC30A4O14863 429 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 CLUP10909 449 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 HOXC12P31275 282 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 MASP1P48740 699 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 HCAR3P49019 387 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 CDH12P55289 794 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 HSF2Q03933 536 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 TCEAL6Q6IPX3 200 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 FRRS1Q6ZNA5 592 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 LRRC70Q7Z2Q7 622 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OR5K1Q8NHB7 308 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OR2AG1Q9H205 316 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 H3BNX3 289 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 TRMUO75648 421 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 LYNP07948 512 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 FAM163BP0C2L3 166 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ADH5P11766 374 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 RPL17P18621 184 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ATP5A1P25705 553 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 BLKP51451 505 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 AP3S2P59780 193 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 RPS14P62263 151 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SCARB2Q14108 478 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ATP6V1C2Q8NEY4 427 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OR52J3Q8NH60 311 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 PIGKQ92643 395 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 JSRP1Q96MG2 331 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 PTPN18Q99952 460 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 GORASP1Q9BQQ3 440 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 CCM2Q9BSQ5 444 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 PCDHGA11Q9Y5H2 935 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OAS3Q9Y6K5 1087 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SQORQ9Y6N5 450 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 CBFA2T3O75081 653 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 NME6O75414 186 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 TCEA3O75764 348 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 GADD45GO95257 159 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 IFNA6P05013 189 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 HLA-DQB2P05538 268 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 NCK1P16333 377 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 VIPR1P32241 457 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 CHRNA4P43681 627 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ATXN1P54253 815 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 COLEC12Q5KU26 742 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 MBOAT1Q6ZNC8 495 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF572Q7Z3I7 529 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 FSTL5Q8N475 847 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SUSD3Q96L08 255 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF570Q96NI8 536 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SPATA9Q9BWV2 254 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OSBPL2Q9H1P3 480 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 C12orf65Q9H3J6 166 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 HMGXB4Q9UGU5 601 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SIGLEC1Q9BZZ2 1709 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 YJEFN3A6XGL0 299 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 hCG_2039718K7EN88 272 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 NRP1O14786 923 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 TNFP01375 233 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SRPRAP08240 638 aaKnown RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ACVR2AP27037 513 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms