RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PTPRCAPQ14761 206 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 C9orf139Q6ZV77 190 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 TMPRSS11FQ6ZWK6 438 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 CCDC186Q7Z3E2 898 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 CENPVQ7Z7K6 275 aaPredicted RBP5.62□□□□□ -1.51
CASP4-208ENST00000530309 CEP57L1Q8IYX8 460 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 TTC30BQ8N4P2 665 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 KBTBD3Q8NAB2 608 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 PPFIBP2Q8ND30 876 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 OR5M8Q8NGP6 311 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 SPDL1Q96EA4 605 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 C17orf77Q96MU5 243 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 ZNF583Q96ND8 569 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 BTBD10Q9BSF8 475 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 ZNF556Q9HAH1 456 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 APOBEC3GQ9HC16 384 aaKnown RBP5.62□□□□□ -1.51
CASP4-208ENST00000530309 ACKR4Q9NPB9 350 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 SLC38A7Q9NVC3 462 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 TMEM221A6NGB7 291 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 DIAPH2O60879 1101 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 SLCO2B1O94956 709 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 F7P08709 466 aaPredicted RBP5.61□□□□□ -1.51
CASP4-208ENST00000530309 AMD1P17707 334 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 DVL1P1P54792 670 aaPredicted RBP5.61□□□□□ -1.51
CASP4-208ENST00000530309 HNRNPKP61978 463 aaKnown RBP eCLIP5.61□□□□□ -1.51
CASP4-208ENST00000530309 RPS18P62269 152 aaKnown RBP5.61□□□□□ -1.51
CASP4-208ENST00000530309 MFAP5Q13361 173 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 CAMK2DQ13557 499 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 KLHL26Q53HC5 615 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 MDH1BQ5I0G3 518 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 LINGO4Q6UY18 593 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 DGLUCYQ7Z3D6 616 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 FAM114A1Q8IWE2 563 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 MAML2Q8IZL2 1156 aaPredicted RBP5.61□□□□□ -1.51
CASP4-208ENST00000530309 CRYBG2Q8N1P7 616 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 CPSF7Q8N684 471 aaKnown RBP5.61□□□□□ -1.51
CASP4-208ENST00000530309 PI4KAP1Q8N8J0 262 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 DMBX1Q8NFW5 382 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 SCRN2Q96FV2 425 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 SEPHS2Q99611 448 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 NUP85Q9BW27 656 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 TCF7L2Q9NQB0 619 aa5.61□□□□□ -1.51
CASP4-208ENST00000530309 TRIP12Q14669 1992 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 TSPY2A6NKD2 308 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 MEIS2O14770 477 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 SYNCRIPO60506 623 aaKnown RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 KRT36O76013 467 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 TSPY3P0CV98 308 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 TSPY8P0CW00 308 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 ACP2P11117 423 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 ZNF41P51814 821 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 TPD52P55327 224 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 TSPY1Q01534 308 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 COG2Q14746 738 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 VWC2Q2TAL6 325 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 ZNF672Q499Z4 452 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 ACCSLQ4AC99 568 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 KRBOX4Q5JUW0 171 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 ZNF771Q7L3S4 317 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 SLFN11Q7Z7L1 901 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 NFE4Q86UQ8 179 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 RNF128Q8TEB7 428 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 MRPS27Q92552 414 aaKnown RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 SFXN2Q96NB2 322 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 ZMAT2Q96NC0 199 aaKnown RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 CTAGE1Q96RT6 745 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 NAA11Q9BSU3 229 aaPredicted RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 ZCCHC17Q9NP64 241 aaKnown RBP5.6□□□□□ -1.51
CASP4-208ENST00000530309 DONSONQ9NYP3 566 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 TUBE1Q9UJT0 475 aa5.6□□□□□ -1.51
CASP4-208ENST00000530309 HYKKA2RU49 373 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 TRIM77I1YAP6 450 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 CELF2O95319 508 aaKnown RBP5.59□□□□□ -1.51
CASP4-208ENST00000530309 C22orf31O95567 290 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 ATP1A1P05023 1023 aaKnown RBP5.59□□□□□ -1.51
CASP4-208ENST00000530309 ERCC2P18074 760 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 THOP1P52888 689 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 TNIP1Q15025 636 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 COMMD2Q86X83 199 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 SGK494Q96LW2 274 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 VN1R1Q9GZP7 353 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 ST6GALNAC4Q9H4F1 302 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 OLFML3Q9NRN5 406 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 PTTG2Q9NZH5 202 aa5.59□□□□□ -1.51
CASP4-208ENST00000530309 FAF1Q9UNN5 650 aaPredicted RBP5.59□□□□□ -1.51
CASP4-208ENST00000530309 EME2A4GXA9 379 aaPredicted RBP5.58□□□□□ -1.52
CASP4-208ENST00000530309 QDPRP09417 244 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 RAB40ALP0C0E4 278 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 MSH3P20585 1137 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 ACHEP22303 614 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 SLC6A6P31641 620 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 ZNF718Q3SXZ3 478 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 SPECC1Q5M775 1068 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 CCNYL2Q5T2Q4 361 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 PLA2G4FQ68DD2 849 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 KRT39Q6A163 491 aa5.58□□□□□ -1.52
CASP4-208ENST00000530309 GDPD4Q6W3E5 623 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms