RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 NFU1Q9UMS0 254 aa5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 HEBP2Q9Y5Z4 205 aa5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 CFAP20Q9Y6A4 193 aaKnown RBP5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 V9GYY5 206 aaPredicted RBP5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 PCM1Q15154 2024 aa5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
RPUSD4-204ENST00000530036 HEATR5BQ9P2D3 2071 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 MN1Q10571 1320 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 UQCRHLA0A096LP55 91 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 PRAMEF33A0A0G2JMD5 474 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CXorf49A8MYA2 514 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 E5RI56 91 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 EIF3FO00303 357 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 IFRD1O00458 451 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 DUX1O43812 170 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 PIAS1O75925 651 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 MATN4O95460 622 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CPNE6O95741 557 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RPLP0P05388 317 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 APOA4P06727 396 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 UQCRHP07919 91 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ITGB6P18564 788 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CHRM3P20309 590 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FDXRP22570 491 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 MCM3P25205 808 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 NDUFS1P28331 727 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CD1CP29017 333 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 STX2P32856 288 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ABCG1P45844 678 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CAPZBP47756 277 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CSE1LP55060 971 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CDKN2DP55273 166 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CLDN6P56747 220 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 OR1D5P58170 312 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CCL7P80098 99 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CFHR1Q03591 330 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 HSPA14Q0VDF9 509 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ILF2Q12905 390 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FOXC1Q12948 553 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 NAB1Q13506 487 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CAMK2BQ13554 666 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 SPIDRQ14159 915 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 SLMAPQ14BN4 828 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 BRD3Q15059 726 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 KYNUQ16719 465 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 KBTBD12Q3ZCT8 623 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CCDC157Q569K6 752 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FAM45BPQ6NSW5 357 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 UNC5DQ6UXZ4 953 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RBM44Q6ZP01 1051 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 C3orf62Q6ZUJ4 267 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 NEK10Q6ZWH5 1172 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TMPRSS9Q7Z410 1059 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ZC3HC1Q86WB0 502 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TMPRSS12Q86WS5 348 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RASGRP3Q8IV61 690 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 GALNT15Q8N3T1 639 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CHCHD4Q8N4Q1 142 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 OR5K2Q8NHB8 316 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FAM45AQ8TCE6 357 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FBF1Q8TES7 1133 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ZFPM2Q8WW38 1151 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RSC1A1Q92681 617 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TFGQ92734 400 aaPredicted RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CDKL2Q92772 493 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 FAM136AQ96C01 138 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 VPS39Q96JC1 886 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 GFM1Q96RP9 751 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 NDNQ99608 321 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 GPR21Q99679 349 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RBBP8Q99708 897 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 SLC30A3Q99726 388 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 OLFM1Q99784 485 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CPNE1Q99829 537 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TBC1D10AQ9BXI6 508 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 TXLNGYQ9BZA5 131 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CCDC68Q9H2F9 335 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 LRRN3Q9H3W5 708 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 RHOJQ9H4E5 214 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ACSS3Q9H6R3 686 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 MVB12BQ9H7P6 319 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 KCNK4Q9NYG8 393 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 OGFRQ9NZT2 677 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 PDP2Q9P2J9 529 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 SLC24A2Q9UI40 661 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 CLCA2Q9UQC9 943 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 DHRS7Q9Y394 339 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 NEUROG3Q9Y4Z2 214 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 APC2O95996 2303 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 ACACAQ13085 2346 aa5.52□□□□□ -1.53
RPUSD4-204ENST00000530036 USP24Q9UPU5 2620 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms