RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 BAATQ14032 418 aaPredicted RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 GFI1BQ5VTD9 330 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 SFMBT2Q5VUG0 894 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 SLC35E4Q6ICL7 350 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 CEACAM20Q6UY09 585 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 RBMS3Q6XE24 437 aaKnown RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 DNAAF5Q86Y56 855 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 PLD3Q8IV08 490 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 FOXP4Q8IVH2 680 aaPredicted RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 KLHDC8BQ8IXV7 354 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 CPSF7Q8N684 471 aaKnown RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 MCUQ8NE86 351 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 NR4A3Q92570 626 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 SLC47A1Q96FL8 570 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 NEK1Q96PY6 1258 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 MOV10L1Q9BXT6 1211 aaKnown RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 TBC1D17Q9HA65 648 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 ACKR4Q9NPB9 350 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 OLFML3Q9NRN5 406 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 ZNF624Q9P2J8 865 aaPredicted RBP4.02□□□□□ -1.77
SOX6-212ENST00000529469 TCF19Q9Y242 345 aa4.02□□□□□ -1.77
SOX6-212ENST00000529469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.02□□□□□ -1.77
SOX6-212ENST00000529469 FLT1P17948 1338 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 ZNF541Q9H0D2 1346 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 MED19A0JLT2 244 aaPredicted RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 FEZF1A0PJY2 475 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 DUXAA6NLW8 204 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 SMIM1B2RUZ4 78 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 SLC22A2O15244 555 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 TOMM70O94826 608 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 AMBPP02760 352 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 INHBAP08476 426 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 IGHV4-38-2P0DP08 117 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 GJA1P17302 382 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 DNASE1P24855 282 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 CALRP27797 417 aaKnown RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 CDH13P55290 713 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 IFI35P80217 286 aaPredicted RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 BECN1Q14457 450 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 BMP2KLQ5H9B9 411 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 ADGRA1Q86SQ6 560 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 EGFL6Q8IUX8 553 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 OLIG1Q8TAK6 271 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 GCNAQ96QF7 691 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 FNDC11Q9BVV2 318 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 MRPL1Q9BYD6 325 aaKnown RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 KLHL4Q9C0H6 718 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 SLC35C2Q9NQQ7 365 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 ANKEF1Q9NU02 776 aa4.01□□□□□ -1.77
SOX6-212ENST00000529469 CPSF2Q9P2I0 782 aaKnown RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 CRNNQ9UBG3 495 aaPredicted RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 MAGED1Q9Y5V3 778 aaPredicted RBP4.01□□□□□ -1.77
SOX6-212ENST00000529469 SOS1Q07889 1333 aaPredicted RBP4□□□□□ -1.77
SOX6-212ENST00000529469 ANKUB1A6NFN9 424 aa4□□□□□ -1.77
SOX6-212ENST00000529469 OR6C76A6NM76 312 aa4□□□□□ -1.77
SOX6-212ENST00000529469 SH2B2O14492 632 aaPredicted RBP4□□□□□ -1.77
SOX6-212ENST00000529469 OR10H2O60403 315 aa4□□□□□ -1.77
SOX6-212ENST00000529469 MED24O75448 989 aa4□□□□□ -1.77
SOX6-212ENST00000529469 TPOP07202 933 aa4□□□□□ -1.77
SOX6-212ENST00000529469 NR2F1P10589 423 aa4□□□□□ -1.77
SOX6-212ENST00000529469 CDKN1AP38936 164 aa4□□□□□ -1.77
SOX6-212ENST00000529469 RPS18P62269 152 aaKnown RBP4□□□□□ -1.77
SOX6-212ENST00000529469 RBM39Q14498 530 aaKnown RBP4□□□□□ -1.77
SOX6-212ENST00000529469 NR1D2Q14995 579 aa4□□□□□ -1.77
SOX6-212ENST00000529469 GARNL3Q5VVW2 1013 aa4□□□□□ -1.77
SOX6-212ENST00000529469 ZNF449Q6P9G9 518 aa4□□□□□ -1.77
SOX6-212ENST00000529469 CORO6Q6QEF8 472 aa4□□□□□ -1.77
SOX6-212ENST00000529469 LINGO4Q6UY18 593 aa4□□□□□ -1.77
SOX6-212ENST00000529469 TMEM173Q86WV6 379 aaPredicted RBP4□□□□□ -1.77
SOX6-212ENST00000529469 ZNF595Q8IYB9 648 aa4□□□□□ -1.77
SOX6-212ENST00000529469 CEP57L1Q8IYX8 460 aa4□□□□□ -1.77
SOX6-212ENST00000529469 PAPD5Q8NDF8 572 aaKnown RBP4□□□□□ -1.77
SOX6-212ENST00000529469 DGAT2Q96PD7 388 aa4□□□□□ -1.77
SOX6-212ENST00000529469 RHNO1Q9BSD3 238 aa4□□□□□ -1.77
SOX6-212ENST00000529469 TRAF4Q9BUZ4 470 aaPredicted RBP4□□□□□ -1.77
SOX6-212ENST00000529469 VPS33BQ9H267 617 aa4□□□□□ -1.77
SOX6-212ENST00000529469 SLC52A3Q9NQ40 469 aa4□□□□□ -1.77
SOX6-212ENST00000529469 GAB2Q9UQC2 676 aa4□□□□□ -1.77
SOX6-212ENST00000529469 TTLL3Q9Y4R7 772 aa4□□□□□ -1.77
SOX6-212ENST00000529469 A0A1W2PRB8 838 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 HYKKA2RU49 373 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 VGLL3A8MV65 326 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 CSPG5O95196 566 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 PATE4P0C8F1 98 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 ERVK-10P10266 1014 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 LIFP15018 202 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 AKR1B1P15121 316 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 CDH11P55287 796 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 TPD52P55327 224 aaPredicted RBP3.99□□□□□ -1.77
SOX6-212ENST00000529469 HSP90AB3PQ58FF7 597 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 CFAP58Q5T655 872 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 TMPRSS11FQ6ZWK6 438 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 OTUD6BQ8N6M0 293 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 LSMEM1Q8N8F7 131 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 SYT2Q8N9I0 419 aaPredicted RBP3.99□□□□□ -1.77
SOX6-212ENST00000529469 CNBD1Q8NA66 436 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 OR10S1Q8NGN2 331 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 OR5M8Q8NGP6 311 aa3.99□□□□□ -1.77
SOX6-212ENST00000529469 MOSPD2Q8NHP6 518 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms