RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PPP1R14DQ9NXH3 145 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 MCM9Q9NXL9 1143 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 KLHL21Q9UJP4 597 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 TUBE1Q9UJT0 475 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 CORO1CQ9ULV4 474 aaPredicted RBP3.1□□□□□ -1.91
CSDE1-209ENST00000525132 BTRCQ9Y297 605 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 PRG3Q9Y2Y8 225 aaPredicted RBP3.1□□□□□ -1.91
CSDE1-209ENST00000525132 PCDHA10Q9Y5I2 948 aa3.1□□□□□ -1.91
CSDE1-209ENST00000525132 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.1□□□□□ -1.91
CSDE1-209ENST00000525132 YLPM1P49750 1951 aaKnown RBP3.1□□□□□ -1.91
CSDE1-209ENST00000525132 CADP27708 2225 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ANK1P16157 1881 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 FER1L5A0AVI2 2057 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 CYP2D7A0A087X1C5 515 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TRGV8A0A0C4DH27 118 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 FRMD3A2A2Y4 597 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TMEM89A2RUT3 159 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TBC1D3BA6NDS4 549 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 STMND1H3BQB6 276 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 CD5LO43866 347 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 DHX16O60231 1041 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 DPM1O60762 260 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 BCAR3O75815 825 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 PDE8BO95263 885 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ELFN1P0C7U0 828 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 HKR1P10072 659 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ITGAMP11215 1152 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 EEF2P13639 858 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TCN2P20062 427 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 AGAP20933 346 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 CALML3P27482 149 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 GCH1P30793 250 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 PRKAR2BP31323 418 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 EIF2DP41214 584 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 CLK1P49759 484 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ACTG1P63261 375 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 PIGFQ07326 219 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF844Q08AG5 666 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 SCARB2Q14108 478 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF169Q14929 603 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 PTPRRQ15256 657 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 BMP2KLQ5H9B9 411 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 DMRTC1Q5HYR2 192 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF362Q5T0B9 420 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 MSANTD2Q6P1R3 559 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TMEM179Q6ZVK1 233 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TECPR1Q7Z6L1 1165 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 DNAJB7Q7Z6W7 309 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 TMEM135Q86UB9 458 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 NDUFAF2Q8N183 169 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 LRRC71Q8N4P6 559 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 WDTC1Q8N5D0 677 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 LMNTD1Q8N9Z9 388 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 MBD3L2Q8NHZ7 208 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 SUN3Q8TAQ9 357 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 NTN5Q8WTR8 489 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 REXO5Q96IC2 774 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 JAKMIP1Q96N16 626 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 LENG8Q96PV6 779 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 SH2D3AQ9BRG2 576 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 SLC25A23Q9BV35 468 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 GPR88Q9GZN0 384 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 RANBP17Q9H2T7 1088 aaKnown RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 MUC13Q9H3R2 512 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 MLXIPLQ9NP71 852 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 INTS13Q9NVM9 706 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 BEX4Q9NWD9 120 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 HYPKQ9NX55 129 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 AATFQ9NY61 560 aaKnown RBP eCLIP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 IL17CQ9P0M4 197 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 SLC25A10Q9UBX3 287 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-209ENST00000525132 KCNN3Q9UGI6 736 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 GDAQ9Y2T3 454 aa3.09□□□□□ -1.91
CSDE1-209ENST00000525132 A0A1W2PQ09 198 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 GTPBP10A4D1E9 387 aaKnown RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 MBLAC1A4D2B0 266 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 NPIPB15A6NHN6 443 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 AGAP5A6NIR3 686 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SH2D7A6NKC9 451 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 FOXO6A8MYZ6 492 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 MYO1GB0I1T2 1018 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 KCNJ18B7U540 433 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TMEM232C9JQI7 657 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 AGPSO00116 658 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 UBE2CO00762 179 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TGFB1I1O43294 461 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SDC3O75056 442 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SLCO2B1O94956 709 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 CCNDBP1O95273 360 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TGDSO95455 350 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PRAMEF12O95522 483 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 BAG2O95816 211 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 ERBB2P04626 1255 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 TPOP07202 933 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 HNRNPCP07910 306 aaKnown RBP eCLIP3.08□□□□□ -1.923e-6■■■□□ 18.5
CSDE1-209ENST00000525132 TNNT1P13805 278 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 PPP3CBP16298 524 aa3.08□□□□□ -1.92
CSDE1-209ENST00000525132 SFPQP23246 707 aaKnown RBP eCLIP3.08□□□□□ -1.92
CSDE1-209ENST00000525132 UQCRC1P31930 480 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms