RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 DACT1Q9NYF0 836 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 KCNS2Q9ULS6 477 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 BARX2Q9UMQ3 279 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 TCF19Q9Y242 345 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CACNA1EQ15878 2313 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SPENQ96T58 3664 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 CLUHO75153 1309 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CCDC171Q6TFL3 1326 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 COL1A2P08123 1366 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 JMJD1CQ15652 2540 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 URB1O60287 2271 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 A0A0G2JPF8 293 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 RRN3P2A6NIE6 340 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 HNRNPCL3B7ZW38 293 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 KLRF2D3W0D1 207 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 MPHOSPH10O00566 681 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 SOCS6O14544 535 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PI15O43692 258 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PLIN1O60240 522 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 HNRNPCL1O60812 293 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 RGS11O94810 467 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TBX6O95947 436 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 IL1AP01583 271 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CSTBP04080 98 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 UBTFL1P0CB47 393 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 DHRS4L1P0CG22 281 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 HNRNPCL4P0DMR1 293 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 LAMP2P13473 410 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 EEF2P13639 858 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 NR1D1P20393 614 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 DNAJB1P25685 340 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 HTR3AP46098 478 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CLCN4P51793 760 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TBX4P57082 545 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CLDN2P57739 230 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PSMC6P62333 389 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 BEX3Q00994 111 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CUL4BQ13620 913 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 MLF2Q15773 248 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 STXBP2Q15833 593 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SYT16Q17RD7 645 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ACCSLQ4AC99 568 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ATP13A5Q4VNC0 1218 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 HSP90AB4PQ58FF6 505 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SPECC1Q5M775 1068 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 FBXO47Q5MNV8 452 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CELF3Q5SZQ8 465 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 FAM83BQ5T0W9 1011 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 GPATCH4Q5T3I0 446 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 CLEC18BQ6UXF7 455 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 B3GNT6Q6ZMB0 384 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 NOL8Q76FK4 1167 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 G2E3Q7L622 706 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PRSS45Q7RTY3 260 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TRMT1LQ7Z2T5 733 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 CACNA2D4Q7Z3S7 1137 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 NOTCH2NLQ7Z3S9 236 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ADGRD2Q7Z7M1 963 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ADGRA1Q86SQ6 560 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SLC9B2Q86UD5 537 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TICAM1Q8IUC6 712 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ERC1Q8IUD2 1116 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CCDC117Q8IWD4 279 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 FBXO16Q8IX29 292 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 ODF3L1Q8IXM7 274 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 C1orf87Q8N0U7 546 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SLC39A11Q8N1S5 342 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TSPYL6Q8N831 410 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 COLGALT1Q8NBJ5 622 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ZNF485Q8NCK3 441 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TAS1R2Q8TE23 839 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 DEPDC1BQ8WUY9 529 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 EXOC4Q96A65 974 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ZNF524Q96C55 264 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SDCCAG3Q96C92 435 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TMEM19Q96HH6 336 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TNIP3Q96KP6 325 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 C17orf77Q96MU5 243 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 MBOAT7Q96N66 472 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ZNF558Q96NG5 402 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 DUX3Q96PT4 197 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TMEM175Q9BSA9 504 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 NPLQ9BXD5 320 aaPredicted RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 PCGF6Q9BYE7 350 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 API5Q9BZZ5 524 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 GPR88Q9GZN0 384 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ZBP1Q9H171 429 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SLC32A1Q9H598 525 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 TRPV4Q9HBA0 871 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PCDH9Q9HC56 1237 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 RGS18Q9NS28 235 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 DDX43Q9NXZ2 648 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 RAI14Q9P0K7 980 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 MTUS1Q9ULD2 1270 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CDC14AQ9UNH5 594 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 LAS1LQ9Y4W2 734 aaKnown RBP1.63□□□□□ -2.15
CD44-212ENST00000524922 RIPK3Q9Y572 518 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 SNX9Q9Y5X1 595 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 R4GN57 208 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms