RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FMO4P31512 558 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 ITGA8P53708 1063 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 HSPA14Q0VDF9 509 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 RPA4Q13156 261 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 CLN3Q13286 438 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 SYTL3Q4VX76 610 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 ZNF470Q6ECI4 717 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 NEPROQ6NW34 567 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 OR4E2Q8NGC2 313 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 TFGQ92734 400 aaPredicted RBP17.38■□□□□ 0.37
CLK4-211ENST00000522556 TMEM159Q96B96 161 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 STAMBPL1Q96FJ0 436 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 MAP3K3Q99759 626 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 SLC17A6Q9P2U8 582 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 CRYL1Q9Y2S2 319 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 PCDHGA7Q9Y5G6 932 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 QSOX1O00391 747 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 IFRD1O00458 451 aaPredicted RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 BTN3A3O00478 584 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 NVLO15381 856 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 KLK10O43240 276 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 SNRNP200O75643 2136 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 RASSF9O75901 435 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 SEC31AO94979 1220 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 ANKRD34CP0C6C1 535 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 POLR2CP19387 275 aaPredicted RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 AOAHP28039 575 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 MLLT3P42568 568 aaPredicted RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 ABCG1P45844 678 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 RPL21P46778 160 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 CD151P48509 253 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 KPNA2P52292 529 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 MPP1Q00013 466 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 CTBP1Q13363 440 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 KCNAB1Q14722 419 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 CACHD1Q5VU97 1274 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 PTRHD1Q6GMV3 140 aaKnown RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 HIBCHQ6NVY1 386 aaPredicted RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 PRSS42Q7Z5A4 293 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 HOOK3Q86VS8 718 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 CILP2Q8IUL8 1156 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 ACVR1CQ8NER5 493 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 SPATA4Q8NEY3 305 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 TTC1Q99614 292 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 CARD6Q9BX69 1037 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 FBXO6Q9NRD1 293 aaPredicted RBP17.37■□□□□ 0.37
CLK4-211ENST00000522556 SLC39A1Q9NY26 324 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 EPHA6Q9UF33 1036 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 ICKQ9UPZ9 632 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 AHCTF1Q8WYP5 2266 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 PTPRQQ9UMZ3 2332 aa17.37■□□□□ 0.37
CLK4-211ENST00000522556 BTN3A1O00481 513 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 RRP8O43159 456 aaKnown RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 RAD51CO43502 376 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 GPC4O75487 556 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 USP1O94782 785 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 GSTM1P09488 218 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 OGNP20774 298 aaKnown RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 RPS3P23396 243 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLK4-211ENST00000522556 SLC1A2P43004 574 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 GSTM4Q03013 218 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 KRT33BQ14525 404 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 CRYMQ14894 314 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 FASTKD3Q14CZ7 662 aaKnown RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 MRNIPQ6NTE8 343 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 ZNF549Q6P9A3 640 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 SLC22A15Q8IZD6 547 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 TAAR9Q96RI9 348 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 SLC30A3Q99726 388 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 ZNF768Q9H5H4 540 aaKnown RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 CPNE5Q9HCH3 593 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 C20orf96Q9NUD7 363 aaPredicted RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 WDR70Q9NW82 654 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 HRASLS2Q9NWW9 162 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 AKAP7Q9P0M2 348 aaPredicted RBP17.36■□□□□ 0.37
CLK4-211ENST00000522556 GNPTGQ9UJJ9 305 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 ASF1AQ9Y294 204 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 MED16Q9Y2X0 877 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 SNX24Q9Y343 169 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 COLEC10Q9Y6Z7 277 aa17.36■□□□□ 0.37
CLK4-211ENST00000522556 ITPR1Q14643 2758 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 EFCAB8A8MWE9 144 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 B4E171 279 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 S1PR4O95977 384 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 PAMP19021 973 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 NDUFS1P28331 727 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 TSPAN7P41732 249 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 MC2RQ01718 297 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 LRRC69Q6ZNQ3 347 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 SYDE1Q6ZW31 735 aaPredicted RBP17.35■□□□□ 0.37
CLK4-211ENST00000522556 VASH2Q86V25 355 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 OOSP2Q86WS3 158 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 LCN9Q8WX39 176 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 ELMO2Q96JJ3 720 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 RAB33BQ9H082 229 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 DPH5Q9H2P9 285 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 MVB12BQ9H7P6 319 aa17.35■□□□□ 0.37
CLK4-211ENST00000522556 RNF14Q9UBS8 474 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms