RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CACHD1Q5VU97 1274 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 PTRHD1Q6GMV3 140 aaKnown RBP20.1■□□□□ 0.81
TRIM35-203ENST00000521253 NEPROQ6NW34 567 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 PCGF5Q86SE9 256 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 SDCCAG8Q86SQ7 713 aaPredicted RBP20.1■□□□□ 0.81
TRIM35-203ENST00000521253 HOOK3Q86VS8 718 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 OOSP2Q86WS3 158 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 ZFAND4Q86XD8 727 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 KRT222Q8N1A0 295 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 OR4E2Q8NGC2 313 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 LPGAT1Q92604 370 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 NRTNQ99748 197 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 DDA1Q9BW61 102 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 SIDT1Q9NXL6 827 aaKnown RBP20.1■□□□□ 0.81
TRIM35-203ENST00000521253 GNPTGQ9UJJ9 305 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 LHX6Q9UPM6 363 aa20.1■□□□□ 0.81
TRIM35-203ENST00000521253 PTPRQQ9UMZ3 2332 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 UBA6A0AVT1 1052 aaPredicted RBP20.09■□□□□ 0.81
TRIM35-203ENST00000521253 TTI1O43156 1089 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 OGNP20774 298 aaKnown RBP20.09■□□□□ 0.81
TRIM35-203ENST00000521253 CASQ1P31415 396 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 EIF3BP55884 814 aaKnown RBP20.09■□□□□ 0.81
TRIM35-203ENST00000521253 RAB15P59190 212 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 HSPA14Q0VDF9 509 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 PRKG2Q13237 762 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 TGIF1Q15583 401 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 DCAF12Q5T6F0 453 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 RNF187Q5TA31 235 aaPredicted RBP20.09■□□□□ 0.81
TRIM35-203ENST00000521253 ANKS6Q68DC2 871 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 SYT10Q6XYQ8 523 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 LRRC6Q86X45 466 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 OR52E1Q8NGJ3 308 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 LCN9Q8WX39 176 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 TCF12Q99081 682 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 CTRCQ99895 268 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 TRIM51Q9BSJ1 452 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 HGH1Q9BTY7 390 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 ASPSCR1Q9BZE9 553 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 FBXO8Q9NRD0 319 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.09■□□□□ 0.81
TRIM35-203ENST00000521253 CDYLQ9Y232 598 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 ASF1AQ9Y294 204 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 SSUH2Q9Y2M2 353 aa20.09■□□□□ 0.81
TRIM35-203ENST00000521253 GPC4O75487 556 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 USP1O94782 785 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 LIPCP11150 499 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 CD82P27701 267 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 AOAHP28039 575 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 CTSL3PQ5NE16 218 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 DNTTIP2Q5QJE6 756 aaKnown RBP20.08■□□□□ 0.81
TRIM35-203ENST00000521253 CENPUQ71F23 418 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 CILP2Q8IUL8 1156 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 VRK3Q8IV63 474 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 SLC22A15Q8IZD6 547 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 OR5AR1Q8NGP9 310 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 ASZ1Q8WWH4 475 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 KLHL6Q8WZ60 621 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 STAMBPL1Q96FJ0 436 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 BIRC8Q96P09 236 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 KRT12Q99456 494 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 SRMSQ9H3Y6 488 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 TFB2MQ9H5Q4 396 aaKnown RBP20.08■□□□□ 0.81
TRIM35-203ENST00000521253 APMAPQ9HDC9 416 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 SEMA5BQ9P283 1151 aa20.08■□□□□ 0.81
TRIM35-203ENST00000521253 LOC400499M0QZD8 3231 aa20.08■□□□□ 0.8
TRIM35-203ENST00000521253 IGHV5-51A0A0C4DH38 117 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 PFDN6O15212 129 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 BANF1O75531 89 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 APOA4P06727 396 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 POLR2CP19387 275 aaPredicted RBP20.07■□□□□ 0.8
TRIM35-203ENST00000521253 FMO4P31512 558 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 SH3BP2P78314 561 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 DHX9Q08211 1270 aaKnown RBP20.07■□□□□ 0.8
TRIM35-203ENST00000521253 MORF4L2Q15014 288 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 MSS51Q4VC12 460 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 BROXQ5VW32 411 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 ZNF470Q6ECI4 717 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 ARMC6Q6NXE6 501 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 DTX1Q86Y01 620 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 UBXN4Q92575 508 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 PANX3Q96QZ0 392 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 CD180Q99467 661 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 MAP3K3Q99759 626 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 TRIT1Q9H3H1 467 aaKnown RBP20.07■□□□□ 0.8
TRIM35-203ENST00000521253 XKR8Q9H6D3 395 aa20.07■□□□□ 0.8
TRIM35-203ENST00000521253 FAM208BQ5VWN6 2430 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 MGAQ8IWI9 3026 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 ADAMTS20P59510 1910 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 TLCD2A6NGC4 264 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 STMND1H3BQB6 276 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 BTN3A3O00478 584 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 NELFEP18615 380 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 PGAM1P18669 254 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 KPNA2P52292 529 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 ADARP55265 1226 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 FOXM1Q08050 763 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 THOC5Q13769 683 aaKnown RBP20.06■□□□□ 0.8
TRIM35-203ENST00000521253 TMED2Q15363 201 aa20.06■□□□□ 0.8
TRIM35-203ENST00000521253 LONRF1Q17RB8 773 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms