RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PIANPQ8IYJ0 282 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 CLDN19Q8N6F1 224 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 SLC35B2Q8TB61 432 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 LCN9Q8WX39 176 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 SRMSQ9H3Y6 488 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 TFB2MQ9H5Q4 396 aaKnown RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 LATS2Q9NRM7 1088 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 C1GALT1Q9NS00 363 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 FARSAQ9Y285 508 aaKnown RBP12.09□□□□□ -0.47
CSMD1-205ENST00000519623 RELNP78509 3460 aa12.09□□□□□ -0.47
CSMD1-205ENST00000519623 LRRK2Q5S007 2527 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 MROH6A6NGR9 719 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 MKRN2OSH3BPM6 223 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
CSMD1-205ENST00000519623 RFPL1O75677 317 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 KLRB1Q12918 225 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 PRKAA1Q13131 559 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 RPA4Q13156 261 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 DBN1Q16643 649 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 UGT8Q16880 541 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 ZNF789Q5FWF6 425 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TAS2R42Q7RTR8 314 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TMEM126BQ8IUX1 230 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 MR1Q95460 341 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 LRFN5Q96NI6 719 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 BAG1Q99933 345 aaPredicted RBP12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TLR10Q9BXR5 811 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TRIM55Q9BYV6 548 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 PITPNM3Q9BZ71 974 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 MVB12BQ9H7P6 319 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 PIH1D1Q9NWS0 290 aaKnown RBP12.08□□□□□ -0.48
CSMD1-205ENST00000519623 MAN2B2Q9Y2E5 1009 aa12.08□□□□□ -0.48
CSMD1-205ENST00000519623 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 MIF4GDA9UHW6 222 aaKnown RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 MEN1O00255 615 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 MATN2O00339 956 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 IFRD1O00458 451 aaPredicted RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 BTN3A1O00481 513 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 PSMD3O43242 534 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 DNAJB5O75953 348 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 AP2A2O94973 939 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 AP2A1O95782 977 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 FTCDO95954 541 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 PDGFAP04085 211 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 MSL3P1P0C860 447 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 CDH3P22223 829 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 RORAP35398 523 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 PREPP48147 710 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 RPS15P62841 145 aaKnown RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 CACNG1Q06432 222 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 ABRQ12979 859 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 PRKG2Q13237 762 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 BOP1Q14137 746 aaKnown RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 POU6F1Q14863 301 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 IZUMO3Q5VZ72 239 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 ASB18Q6ZVZ8 466 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 SYVN1Q86TM6 617 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 ADGRF3Q8IZF5 1079 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 DSELQ8IZU8 1212 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 UBL4BQ8N7F7 174 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 OR1L3Q8NH93 324 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 THAP4Q8WY91 577 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 SEC14L1Q92503 715 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 TFGQ92734 400 aaPredicted RBP12.07□□□□□ -0.48
CSMD1-205ENST00000519623 LRRC45Q96CN5 670 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 TRAPPC9Q96Q05 1148 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 CHST8Q9H2A9 424 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 XKR8Q9H6D3 395 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 VPS37BQ9H9H4 285 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 SOHLH2Q9NX45 425 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 PRSS21Q9Y6M0 314 aa12.07□□□□□ -0.48
CSMD1-205ENST00000519623 GSAPA4D1B5 854 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CLEC18AA5D8T8 446 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 KLK3P07288 261 aaPredicted RBP12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CAPN1P07384 714 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 GSTM1P09488 218 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 RAB40ALP0C0E4 278 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 TPBGLP0DKB5 382 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 ACADLP28330 430 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 GSDMDP57764 484 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 GSTM4Q03013 218 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 IL10RAQ13651 578 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 P3H1Q32P28 736 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 ZNF449Q6P9G9 518 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 CLEC18BQ6UXF7 455 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 AMIGO1Q86WK6 493 aa12.06□□□□□ -0.48
CSMD1-205ENST00000519623 GAS2L3Q86XJ1 694 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms