RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 NONOQ15233 471 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 TAF5Q15542 800 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 UBE2SQ16763 222 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZNF876PQ49A33 203 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZNF667Q5HYK9 610 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 SLC35E4Q6ICL7 350 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 FBXO46Q6PJ61 603 aaPredicted RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 CEACAM20Q6UY09 585 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZNF497Q6ZNH5 498 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 TADA2BQ86TJ2 420 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZNF248Q8NDW4 579 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 KLHDC9Q8NEP7 349 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 CADM4Q8NFZ8 388 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 MPHOSPH6Q99547 160 aaKnown RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 CMKLR1Q99788 373 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZMYND12Q9H0C1 365 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ZSCAN16Q9H4T2 348 aaPredicted RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 MAP3K20Q9NYL2 800 aaKnown RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 KIAA1456Q9P272 454 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 MORF4L1Q9UBU8 362 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 TAGLN3Q9UI15 199 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 MTMR6Q9Y217 621 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 OR2W1Q9Y3N9 320 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 LSM4Q9Y4Z0 139 aaKnown RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 ATP6V1DQ9Y5K8 247 aa4.28□□□□□ -1.72
VPS37A-205ENST00000519515 BAZ2AQ9UIF9 1905 aaKnown RBP4.28□□□□□ -1.72
VPS37A-205ENST00000519515 PFASO15067 1338 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 MYH1P12882 1939 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 TMEM202A6NGA9 273 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SLC15A5A6NIM6 579 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 HOXD10P28358 340 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 PSMC4P43686 418 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 TERF1P54274 439 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 RAD23BP54727 409 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 DRG2P55039 364 aaKnown RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 ISL1P61371 349 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 RPS6P62753 249 aaKnown RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SP3Q02447 781 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 C2orf68Q2NKX9 166 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 ARHGEF16Q5VV41 709 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 LINGO2Q7L985 606 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 GPR142Q7Z601 462 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SLC35F3Q8IY50 421 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 OR2AK2Q8NG84 335 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 ZNF396Q96N95 335 aaPredicted RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 TAAR1Q96RJ0 339 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 BBS4Q96RK4 519 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 MTERF1Q99551 399 aaKnown RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 NAP1L4Q99733 375 aaKnown RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 POLR3CQ9BUI4 534 aaPredicted RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 MAF1Q9H063 256 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 PORCNQ9H237 461 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SAGE1Q9NXZ1 904 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 CYP39A1Q9NYL5 469 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 ADD3Q9UEY8 706 aaKnown RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 FBXO9Q9UK97 447 aaPredicted RBP4.27□□□□□ -1.73
VPS37A-205ENST00000519515 KCNK7Q9Y2U2 307 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 FAM96BQ9Y3D0 163 aa4.27□□□□□ -1.73
VPS37A-205ENST00000519515 SIPA1L1O43166 1804 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 ASB14A6NK59 587 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 MEIS2O14770 477 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 ZNF500O60304 480 aaPredicted RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 WDR1O75083 606 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 PGK2P07205 417 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 CYP2B6P20813 491 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 U2AF2P26368 475 aaKnown RBP eCLIP4.26□□□□□ -1.733e-7■□□□□ 8.6
VPS37A-205ENST00000519515 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 CCND2P30279 289 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 BDKRB2P30411 391 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 RGS2P41220 211 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 TRAPPC10P48553 1259 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 HOXA1P49639 335 aaPredicted RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 UBXN2AP68543 259 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 GTF2H2Q13888 395 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 BRD3Q15059 726 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 TCTN1Q2MV58 587 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 LETM2Q2VYF4 491 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 RILPL1Q5EBL4 403 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 CCNYL2Q5T2Q4 361 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 GTF2H2CQ6P1K8 395 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 SLC27A1Q6PCB7 646 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 KCTD18Q6PI47 426 aaPredicted RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 ASB18Q6ZVZ8 466 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 SUGP1Q8IWZ8 645 aaKnown RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 DHX40Q8IX18 779 aaKnown RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 LSM14AQ8ND56 463 aaKnown RBP4.26□□□□□ -1.73
VPS37A-205ENST00000519515 TBCKQ8TEA7 893 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 ERO1AQ96HE7 468 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 C17orf77Q96MU5 243 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 BPIFA1Q9NP55 256 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 PXMP2Q9NR77 195 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 CFAP45Q9UL16 551 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 LOXL2Q9Y4K0 774 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 SMAD5-AS1Q9Y6J3 95 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 LAMB1P07942 1786 aa4.26□□□□□ -1.73
VPS37A-205ENST00000519515 LAMA4Q16363 1823 aa4.25□□□□□ -1.73
VPS37A-205ENST00000519515 FOCADQ5VW36 1801 aa4.25□□□□□ -1.73
VPS37A-205ENST00000519515 ECM29Q5VYK3 1845 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms