RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CRY2Q49AN0 593 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 C9orf152Q5JTZ5 239 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 FAM72AQ5TYM5 149 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 FAM72DQ6L9T8 149 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 TMEM173Q86WV6 379 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 FAM72BQ86X60 149 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 OR2T12Q8NG77 320 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 SPACA9Q96E40 222 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 SERINC2Q96SA4 455 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 LMF2Q9BU23 707 aaKnown RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 CCDC106Q9BWC9 280 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 WNT5BQ9H1J7 359 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 ACKR4Q9NPB9 350 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 EQTNQ9NQ60 294 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 PIH1D3Q9NQM4 214 aaKnown RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 OLFML3Q9NRN5 406 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 NRBP1Q9UHY1 535 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF112Q9UJU3 913 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 TCF19Q9Y242 345 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 JRKLQ9Y4A0 524 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 SPIN1Q9Y657 262 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 RPGRIP1LQ68CZ1 1315 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 ANKUB1A6NFN9 424 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 P4HA2O15460 535 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 XRCC3O43542 346 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 OR10H2O60403 315 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 PLOD3O60568 738 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 SLC22A3O75751 556 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 PRSS1P07477 247 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 LINGO3P0C6S8 592 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 OR2T7P0C7T2 308 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 DANCRP0C864 163 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 PFKFB1P16118 471 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 GABRA5P31644 462 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TIMP3P35625 211 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 SLC9A3P48764 834 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 CCR3P51677 355 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 THOP1P52888 689 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-207ENST00000518569 PRKAA1Q13131 559 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 ALCAMQ13740 583 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 SNTB1Q13884 538 aaKnown RBP3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TECRLQ5HYJ1 363 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 MDH1BQ5I0G3 518 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TMEM211Q6ICI0 200 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 FAM198BQ6UWH4 519 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 MARK2Q7KZI7 788 aaKnown RBP3.43□□□□□ -1.86
VPS13B-207ENST00000518569 SLC26A9Q7LBE3 791 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 CREBRFQ8IUR6 639 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 PLD3Q8IV08 490 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 OR8H2Q8N162 312 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 CRYBG2Q8N1P7 616 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 OR2AJ1Q8NGZ0 328 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 CFAP61Q8NHU2 1237 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 ATL1Q8WXF7 558 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 STAMBPL1Q96FJ0 436 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TSPAN18Q96SJ8 248 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TXLNGYQ9BZA5 131 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 DPAGT1Q9H3H5 408 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 ANKZF1Q9H8Y5 726 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 COQ3Q9NZJ6 369 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 STK26Q9P289 416 aa3.43□□□□□ -1.86
VPS13B-207ENST00000518569 SOS1Q07889 1333 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-207ENST00000518569 TMEM221A6NGB7 291 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SYNCRIPO60506 623 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 RNASEH1O60930 286 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TOMM70O94826 608 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SP1P08047 785 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 INHBAP08476 426 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 IGHV4-38-2P0DP08 117 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 MT3P25713 68 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 CDKN1AP38936 164 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 CAPZA2P47755 286 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 CDH13P55290 713 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 AIMP1Q12904 312 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 PRPF4BQ13523 1007 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 IL11RAQ14626 422 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 WDR38Q5JTN6 314 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ERMARDQ5T6L9 678 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 RNASEH2BQ5TBB1 312 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SLC35E4Q6ICL7 350 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 MEX3BQ6ZN04 569 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ANO5Q75V66 913 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 GET4Q7L5D6 327 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 DGLUCYQ7Z3D6 616 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 CAMKMTQ7Z624 323 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 MAML2Q8IZL2 1156 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TC2NQ8N9U0 490 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 LRRC8CQ8TDW0 803 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 RNF128Q8TEB7 428 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TM9SF4Q92544 642 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ANP32BQ92688 251 aaKnown RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SLAMF9Q96A28 289 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TRIM44Q96DX7 344 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SLC47A1Q96FL8 570 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF354BQ96LW1 612 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF830Q96NB3 372 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-207ENST00000518569 FNDC11Q9BVV2 318 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 GPR88Q9GZN0 384 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms