RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 MT-CYBP00156 380 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GLUD1P00367 558 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MT-CO3P00414 261 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAHP00439 452 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AK1P00568 194 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINC1P01008 464 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AGTP01019 485 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PDGFBP01127 241 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GH1P01241 217 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GH2P01242 217 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL1AP01583 271 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C9P02748 559 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TFP02787 698 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLKB1P03952 638 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSF2P04141 144 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPING1P05155 500 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 S100A9P06702 114 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASGR1P07306 291 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IVLP07476 585 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 YES1P07947 543 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RHOP08100 348 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MMP2P08253 660 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYC1P08574 325 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ABHD2P08910 425 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MMP10P09238 476 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR52Z1P0C646 297 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM58BPP0C7Q3 252 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DANCRP0C864 163 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLA2G4BP0C869 781 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 POLR2MP0CAP2 368 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBTFL6P0CB48 400 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CALCBP10092 127 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPP1P10451 314 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DLATP10515 647 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSPA8P11142 646 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RALAP11233 206 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 G6PDP11413 515 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCNAP12004 261 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 VPREB1P12018 145 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NCF1P14598 390 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PKMP14618 531 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC2A4P14672 509 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MMP9P14780 707 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCF4P15884 667 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CREB1P16220 341 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPP3CBP16298 524 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF18P17022 549 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ENGP17813 658 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GNAZP19086 355 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNNI3P19429 210 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANXA7P20073 488 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NR1D1P20393 614 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYP2A7P20853 494 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AGAP20933 346 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DRD1P21728 446 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GALP22466 123 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HNRNPA2B1P22626 353 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAX7P23759 505 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRPH2P23942 346 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NR2F2P24468 414 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACAT1P24752 427 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADRA1DP25100 572 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 YY1P25490 414 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ITGA3P26006 1051 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD27P26842 260 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 POU1F1P28069 291 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GSTM2P28161 218 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HTR2AP28223 471 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACADLP28330 430 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HOXD9P28356 352 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DUSP1P28562 367 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PTPN4P29074 926 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MPGP29372 298 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCND3P30281 292 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NTSR1P30989 418 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TIA1P31483 386 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC6A6P31641 620 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SFNP31947 248 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHRNA3P32297 505 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MCM5P33992 734 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RFC2P35250 354 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IGHMBP2P38935 993 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCT6AP40227 531 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CETN2P41208 172 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 WNT5AP41221 380 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP25P42331 645 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRCPP42785 496 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CRKLP46109 303 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IER3P46695 156 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNJ1P48048 391 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC6A12P48065 614 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPBWR1P48145 328 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CAMLGP49069 296 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DHPSP49366 369 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GLUD2P49448 558 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CXCR3P49682 368 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CEBPDP49716 269 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 THBS3P49746 956 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUMBP49757 651 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HTR6P50406 440 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms