RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CA6P23280 308 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PPOXP50336 477 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 XGP55808 180 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 RPS18P62269 152 aaKnown RBP0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 CSNK2BP67870 215 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 BTKQ06187 659 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PLA2G7Q13093 441 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 SPARCL1Q14515 664 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PPP2R5BQ15173 497 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 SPECC1Q5M775 1068 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 AGBL2Q5U5Z8 902 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 NXNQ6DKJ4 435 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 DPPA4Q7L190 304 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 TCEAL8Q8IYN2 117 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 DHX58Q96C10 678 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 GCC1Q96CN9 775 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 CNRIP1Q96F85 164 aaPredicted RBP0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 SIPA1Q96FS4 1042 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 NECTIN4Q96NY8 510 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 ACOX2Q99424 681 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PIP5K1AQ99755 562 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 OVOL2Q9BRP0 275 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PCDH12Q9NPG4 1184 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 G6PC2Q9NQR9 355 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PEMTQ9UBM1 199 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 NEU3Q9UQ49 428 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 PCDHGB2Q9Y5G2 931 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 NOTCH1P46531 2555 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 NID2Q14112 1375 aa0.06□□□□□ -2.4
SCARNA23-201ENST00000516060 A0A1W2PN81 502 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 VWA3AA6NCI4 1184 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 VSTM5A8MXK1 200 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 SEC14L5O43304 696 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 LYPD3O95274 346 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 VTNP04004 478 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 TNFAIP3P21580 790 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CA4P22748 312 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 HOXC9P31274 260 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CHRNA7P36544 502 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 ELK3P41970 407 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 MCM2P49736 904 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 ATP4BP51164 291 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 PRKCZQ05513 592 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 IFIT5Q13325 482 aaKnown RBP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 ZNF667Q5HYK9 610 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 C9orf129Q5T035 196 aaKnown RBP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 IZUMO3Q5VZ72 239 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 TXNDC8Q6A555 127 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 KLC3Q6P597 504 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CHMP1BQ7LBR1 199 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 TADA2BQ86TJ2 420 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CCDC117Q8IWD4 279 aaPredicted RBP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 MKXQ8IYA7 352 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 SLC38A9Q8NBW4 561 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 GATAD1Q8WUU5 269 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 C10orf90Q96M02 699 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 MAPKAP1Q9BPZ7 522 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 PCGF1Q9BSM1 259 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CCDC28BQ9BUN5 200 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CCSER1Q9C0I3 900 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 HOXD1Q9GZZ0 328 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 PLEKHA3Q9HB20 300 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 DDX21Q9NR30 783 aaKnown RBP eCLIP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 MBNL1Q9NR56 388 aaKnown RBP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 SDR39U1Q9NRG7 319 aaPredicted RBP0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 CLEC4EQ9ULY5 219 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 PPP2R2CQ9Y2T4 447 aa0.05□□□□□ -2.4
SCARNA23-201ENST00000516060 ARHGEF40Q8TER5 1519 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 IGLV3-16A0A075B6K0 115 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 IGKV2D-24A0A075B6R9 120 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 G3V2L1 256 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 TAF4O00268 1085 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 ZNF861PO60384 105 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 FAM155BO75949 473 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 SEC24AO95486 1093 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 ACP2P11117 423 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 POU1F1P28069 291 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 CD81P60033 236 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 MEF2BQ02080 365 aaPredicted RBP0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 GALNT2Q10471 571 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 PRKAA1Q13131 559 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 NR1D2Q14995 579 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 RNPS1Q15287 305 aaKnown RBP0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 USP41Q3LFD5 358 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 LIN54Q6MZP7 749 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 LCLAT1Q6UWP7 414 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 RNF130Q86XS8 419 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 HIPK1Q86Z02 1210 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 EID3Q8N140 333 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 GCSAMQ8N6F7 178 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 EMC1Q8N766 993 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 C4orf32Q8N8J7 132 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 USP38Q8NB14 1042 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 PCYOX1LQ8NBM8 494 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 SRSF12Q8WXF0 261 aaKnown RBP0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 FRAT1Q92837 279 aaPredicted RBP0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 ELSPBP1Q96BH3 223 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 IKZF5Q9H5V7 419 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 ARFGAP3Q9NP61 516 aa0.04□□□□□ -2.4
SCARNA23-201ENST00000516060 PPANQ9NQ55 473 aaKnown RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms