RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 PIK3CAP42336 1068 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TAF6P49848 677 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ALDH3A2P51648 485 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 F2RL1P55085 397 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CEBPZQ03701 1054 aaKnown RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 UBXN1Q04323 297 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MAD2L1Q13257 205 aaPredicted RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 FRG1Q14331 258 aaKnown RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 CCDC6Q16204 474 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ASTE1Q2TB18 679 aaPredicted RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 PCGF3Q3KNV8 242 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KRBOX4Q5JUW0 171 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CCNYL2Q5T2Q4 361 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 STPG1Q5TH74 334 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KRT79Q5XKE5 535 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ASB18Q6ZVZ8 466 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 PLPPR4Q7Z2D5 763 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TSPAN33Q86UF1 283 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CTAGE4Q8IX94 777 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CARNMT1Q8N4J0 409 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MINDY1Q8N5J2 469 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MAB21L3Q8N8X9 362 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KBTBD3Q8NAB2 608 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 APPL2Q8NEU8 664 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 OR8H1Q8NGG4 311 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 OR5R1Q8NH85 324 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TRPC4APQ8TEL6 797 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ORAI1Q96D31 301 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 WDFY2Q96P53 400 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 DGAT2Q96PD7 388 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MTERF1Q99551 399 aaKnown RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 NEURL2Q9BR09 285 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 C1QTNF1Q9BXJ1 281 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 DNAI2Q9GZS0 605 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 OSGEPL1Q9H4B0 414 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 PSD3Q9NYI0 1048 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 OGFRQ9NZT2 677 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CWC15Q9P013 229 aaKnown RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 FBXL17Q9UF56 701 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 FBXW11Q9UKB1 542 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 POU2F3Q9UKI9 436 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KCNS2Q9ULS6 477 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CCDC141Q6ZP82 1450 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 ATP7AQ04656 1500 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 KDM5DQ9BY66 1539 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SAMD9LQ8IVG5 1584 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 CEP170BQ9Y4F5 1589 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 A0A1W2PP11 408 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 TRBC2A0A5B9 178 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 M0QZ24 198 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SNAP23O00161 211 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 MAP2K7O14733 419 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 STX6O43752 255 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 WDR1O75083 606 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SLC25A12O75746 678 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 RECQL5O94762 991 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 NKX2-2O95096 273 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 GOSR1O95249 250 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 PAK4O96013 591 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 FYNP06241 537 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SRPRAP08240 638 aaKnown RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 FAM106CPP0CH98 169 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 CPT2P23786 658 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 PTAFRP25105 342 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 MARK3P27448 753 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 IL15P40933 162 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 GLIPR1P48060 266 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 HOXA1P49639 335 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 PNLIPRP2P54317 469 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 PDE1BQ01064 536 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 TFAP4Q01664 338 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 RUNX1T1Q06455 604 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 ALCAMQ13740 583 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SNTB1Q13884 538 aaKnown RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 RAB6CQ53S08 254 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 CST9LP1Q5W188 147 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 C18orf63Q68DL7 685 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 C19orf48Q6RUI8 117 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 GDPD4Q6W3E5 623 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 DSG4Q86SJ6 1040 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SDCCAG8Q86SQ7 713 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 KBTBD6Q86V97 674 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 ERC1Q8IUD2 1116 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 EPHX4Q8IUS5 362 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 METTL27Q8N6F8 245 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 TMCO5AQ8N6Q1 288 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 OR6J1Q8NGC5 347 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 BBS10Q8TAM1 723 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 SETD6Q8TBK2 473 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 MGARPQ8TDB4 240 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 DNAAF4Q8WXU2 420 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 APBB2Q92870 758 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 ZNF622Q969S3 477 aaKnown RBP eCLIP3.09□□□□□ -1.91
HERC4-215ENST00000515753 SIPA1Q96FS4 1042 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 CCDC43Q96MW1 224 aaKnown RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 NAP1L5Q96NT1 182 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 FNBP1Q96RU3 617 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 CMKLR1Q99788 373 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms