RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 OR56A5P0C7T3 313 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 F8A1P23610 371 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 ADRA1DP25100 572 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 OAS2P29728 719 aaKnown RBP13.29□□□□□ -0.28
TCOF1-215ENST00000515516 PREPP48147 710 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 NFKB2Q00653 900 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 PLOD1Q02809 727 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-215ENST00000515516 KCNC4Q03721 635 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 DNASE1L3Q13609 305 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 ERV3-1Q14264 604 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 OASLQ15646 514 aaKnown RBP13.29□□□□□ -0.28
TCOF1-215ENST00000515516 AFTPHQ6ULP2 937 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 CERS6Q6ZMG9 384 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 AMIGO1Q86WK6 493 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 OR6P1Q8NGX9 317 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 SEC14L1Q92503 715 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 ELMO1Q92556 727 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 TSSK1BQ9BXA7 367 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 TWSG1Q9GZX9 223 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 OR52A5Q9H2C5 316 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 TFB2MQ9H5Q4 396 aaKnown RBP13.29□□□□□ -0.28
TCOF1-215ENST00000515516 SYTL2Q9HCH5 934 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 C1GALT1Q9NS00 363 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 POLHQ9Y253 713 aa13.29□□□□□ -0.28
TCOF1-215ENST00000515516 SDK2Q58EX2 2172 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 KALRNO60229 2985 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 OR51F1A6NGY5 319 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 SLC9B1P1A6NJY1 282 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 C2orf74A8MZ97 194 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 KDM1AO60341 852 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 SCRG1O75711 98 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 SUN1O94901 812 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 TIAF1O95411 115 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 KLK3P07288 261 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 APRTP07741 180 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 CCDC175P0C221 793 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PSMA3P25788 255 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PDHA2P29803 388 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PRDX3P30048 256 aaKnown RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 RPS15P62841 145 aaKnown RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PRAMEP78395 509 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PRKG2Q13237 762 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 BRD3Q15059 726 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 GPR19Q15760 415 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 FASTKD1Q53R41 847 aaKnown RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 TSTD2Q5T7W7 516 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 ATP1A1-AS1Q5TC04 95 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 MEI1Q5TIA1 1274 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PPHLN1Q8NEY8 458 aaKnown RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 OR52E1Q8NGJ3 308 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 C9orf43Q8TAL5 461 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-215ENST00000515516 CT55Q8WUE5 264 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 HDAC10Q969S8 669 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 RANBP9Q96S59 729 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 LZTFL1Q9NQ48 299 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 POLG2Q9UHN1 485 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 ANAPC5Q9UJX4 755 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 POMT2Q9UKY4 750 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 RIMKLBQ9ULI2 386 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 ASF1AQ9Y294 204 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 PCDHGA6Q9Y5G7 932 aa13.28□□□□□ -0.28
TCOF1-215ENST00000515516 ZFC3H1O60293 1989 aaKnown RBP13.27□□□□□ -0.28
TCOF1-215ENST00000515516 CDC14CA4D256 554 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 BTN3A1O00481 513 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 SUV39H1O43463 412 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 CREG1O75629 220 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 WISP1O95388 367 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 RECKO95980 971 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 GOT2P00505 430 aaKnown RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 ETS1P14921 441 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 FOXN2P32314 431 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 SEMA5AQ13591 1074 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 CCNG2Q16589 344 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 AARS2Q5JTZ9 985 aaKnown RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 PTRH1Q86Y79 214 aaKnown RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 OR4L1Q8NH43 312 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 CPT1BQ92523 772 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 N4BP2L2Q92802 583 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 MR1Q95460 341 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-215ENST00000515516 CLIP3Q96DZ5 547 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 TLR10Q9BXR5 811 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 LATS2Q9NRM7 1088 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 SERTAD3Q9UJW9 196 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 BTRCQ9Y297 605 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 PRSS21Q9Y6M0 314 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 ZNF462Q96JM2 2506 aa13.27□□□□□ -0.29
TCOF1-215ENST00000515516 MKRN2OSH3BPM6 223 aa13.26□□□□□ -0.29
TCOF1-215ENST00000515516 PYCARD-AS1I3L0S3 204 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms