RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NPWQ8N729 165 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 C11orf65Q8NCR3 313 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PXYLP1Q8TE99 480 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 HTRA1Q92743 480 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 NSL1Q96IY1 281 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 KCNK16Q96T55 309 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PAAF1Q9BRP4 392 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ACTR6Q9GZN1 396 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RIMS4Q9H426 269 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PRDM12Q9H4Q4 367 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ALG2Q9H553 416 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 UFSP2Q9NUQ7 469 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DNAJC11Q9NVH1 559 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 HPF1Q9NWY4 346 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 AP4S1Q9Y587 144 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM92AA1XBS5 289 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ISPDA4D126 451 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF701M0R085 212 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PLD2O14939 933 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DNAJA2O60884 412 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TNFRSF21O75509 655 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 POLBP06746 335 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ACAA1P09110 424 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MYL2P10916 166 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MGAT1P26572 445 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 NOS3P29474 1203 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TYK2P29597 1187 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 GNG10P50151 68 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 P2RY4P51582 365 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RIDAP52758 137 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ACTR3P61158 418 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ALKBH1Q13686 389 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MFSD13AQ14CX5 517 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CRTC2Q53ET0 693 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM91A1Q658Y4 838 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CNSTQ6PJW8 725 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ZCCHC23Q6ZST2 131 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PRSS42Q7Z5A4 293 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ASPGQ86U10 573 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ARMC8Q8IUR7 673 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 OXR1Q8N573 874 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF248Q8NDW4 579 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FBXO27Q8NI29 283 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ADAM32Q8TC27 787 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PCED1BQ96HM7 432 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 KLHL32Q96NJ5 620 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PANX3Q96QZ0 392 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RTP3Q9BQQ7 232 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ULBP1Q9BZM6 244 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RPF2Q9H7B2 306 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 POLE4Q9NR33 117 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CUEDC1Q9NWM3 386 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TAS2R1Q9NYW7 299 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 COX16Q9P0S2 106 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 EIF3KQ9UBQ5 218 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 Q9Y3F1 56 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MIA3Q5JRA6 1907 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 A0A1B0GTW7 788 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MYBPHLA2RUH7 354 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CLDN25C9JDP6 229 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 WRBO00258 174 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TRIM38O00635 465 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SOCS5O75159 536 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CELF2O95319 508 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 LCKP06239 509 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 BPGMP07738 259 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 F7P08709 466 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CTGFP29279 349 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 EEF1DP29692 281 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FLI1Q01543 452 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 NME3Q13232 169 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 BTN1A1Q13410 526 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 GRB7Q14451 532 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 LDLRAP1Q5SW96 308 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ATAD3CQ5T2N8 411 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ARTNQ5T4W7 220 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CST9Q5W186 159 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PKN3Q6P5Z2 889 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM35AQ86V20 835 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SNX29P2Q8IUI4 249 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CNTD1Q8N815 330 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TRPV1Q8NER1 839 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 OR52H1Q8NGJ2 320 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DEPDC1BQ8WUY9 529 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC5A11Q8WWX8 675 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 NTAN1Q96AB6 310 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PGAP3Q96FM1 320 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DCUN1D1Q96GG9 259 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SENP8Q96LD8 212 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 HMG20AQ9NP66 347 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF224Q9NZL3 707 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DNMT3BQ9UBC3 853 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 EXTL2Q9UBQ6 330 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 NEU3Q9UQ49 428 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DOCK4Q8N1I0 1966 aa7.35□□□□□ -1.23
PDLIM5-219ENST00000514743 H3BMQ9 156 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms