RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 CCNKO75909 580 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 COL6A1P12109 1028 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 ZNF7P17097 686 aaPredicted RBP13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 HTR1EP28566 365 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 SOX6P35712 828 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 POLR2IP36954 125 aaKnown RBP13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 HPCAL1P37235 193 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 PBX3P40426 434 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 SLC11A2P49281 568 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 HTR6P50406 440 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 STC1P52823 247 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 NCS1P62166 190 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 FBXL22Q6P050 247 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 MSANTD2Q6P1R3 559 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 C17orf99Q6UX52 265 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 FAM151BQ6UXP7 276 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 SLC44A2Q8IWA5 706 aaPredicted RBP13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 PIK3C3Q8NEB9 887 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 HMGCLL1Q8TB92 370 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 ZFP90Q8TF47 636 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 NT5C3BQ969T7 300 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 ACBD6Q9BR61 282 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 ARL15Q9NXU5 204 aa13.67□□□□□ -0.22
TSPAN17-208ENST00000514705 EFCAB9A8MZ26 197 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 TFECO14948 347 aaPredicted RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 AIREO43918 545 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GJB3O75712 270 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 EPB42P16452 691 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GALNT1Q10472 559 aaPredicted RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 MARCH8Q5T0T0 291 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 TMEM207Q6UWW9 146 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SCML4Q8N228 414 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 MYOCQ99972 504 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 ASB8Q9H765 288 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 TLR8Q9NR97 1041 aaKnown RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GIMAP4Q9NUV9 329 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 IDH3BO43837 385 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GPR32O75388 356 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GNRH1P01148 92 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 CYP11A1P05108 521 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 C7P10643 843 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 COPZ1P61923 177 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 FPGSQ05932 587 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 OR4F6Q8NGB9 312 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 OR5K1Q8NHB7 308 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 UBXN10Q96LJ8 280 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 CHCHD6Q9BRQ6 235 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 TMEM39AQ9NV64 488 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SH3BP4Q9P0V3 963 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SLC22A1O15245 554 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GSTT2P0CG29 244 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GSTT2BP0CG30 244 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SLC26A3P40879 764 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 HTRA3P83110 453 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 KAT8Q9H7Z6 458 aaKnown RBP13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 PCDHB5Q9Y5E4 795 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 PCDHGA11Q9Y5H2 935 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 SHROOM3Q8TF72 1996 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 COL4A5P29400 1685 aa13.66□□□□□ -0.22
TSPAN17-208ENST00000514705 EEDO75530 441 aaKnown RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 CYP7B1O75881 506 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 ITGALP20701 1170 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 KANK2Q63ZY3 851 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SH3YL1Q96HL8 342 aaPredicted RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 ZNF599Q96NL3 588 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 NMUR1Q9HB89 426 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 BTBD3Q9Y2F9 522 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 GPR45Q9Y5Y3 372 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SIPA1L1O43166 1804 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SCELO95171 688 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 RPL9P32969 192 aaKnown RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 GPR15P49685 360 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SEMA3BQ13214 749 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SELPLGQ14242 412 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 C18orf21Q32NC0 220 aaPredicted RBP13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 APOLD1Q96LR9 279 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
TSPAN17-208ENST00000514705 CAB39Q9Y376 341 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms