RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 AIG1Q9NVV5 245 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CNOT6Q9ULM6 557 aaKnown RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 COQ6Q9Y2Z9 468 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 GPR45Q9Y5Y3 372 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ATG2BQ96BY7 2078 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 PLK4O00444 970 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 TSPAN6O43657 245 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 NRP2O60462 931 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 ATG13O75143 517 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 APODP05090 189 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 EPHX1P07099 455 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 EPB42P16452 691 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 CYP2A7P20853 494 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 ARL1P40616 181 aaPredicted RBP14.63□□□□□ -0.07
VCAN-211ENST00000513984 DPP6P42658 865 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 HNMTP50135 292 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 HTR6P50406 440 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 AP1S2P56377 157 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 ERVK-8P63133 956 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 MMEL1Q495T6 779 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 Q6ZSR9 355 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 LRRC70Q7Z2Q7 622 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 NLRP8Q86W28 1048 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 SNX31Q8N9S9 440 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 GLMNQ92990 594 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 CCDC124Q96CT7 223 aaKnown RBP14.63□□□□□ -0.07
VCAN-211ENST00000513984 CDRT15Q96T59 188 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 BRINP2Q9C0B6 783 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 SLC32A1Q9H598 525 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 STOML1Q9UBI4 398 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 TRPS1Q9UHF7 1281 aa14.63□□□□□ -0.07
VCAN-211ENST00000513984 ANTXRLA6NF34 631 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 FKBP6O75344 327 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 GSTM1P09488 218 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 HIST1H2AGP0C0S8 130 aaPredicted RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 EBLN1P0CF75 366 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 HIST1H2ADP20671 130 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 HMOX2P30519 316 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 GCKP35557 465 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 P2RY2P41231 377 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SLC6A12P48065 614 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 PSMD8P48556 350 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 GSTM4Q03013 218 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 ZNF423Q2M1K9 1284 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 C6orf136Q5SQH8 315 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 AAGABQ6PD74 315 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SCIMPQ6UWF3 145 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 NUDT18Q6ZVK8 323 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.62□□□□□ -0.07
VCAN-211ENST00000513984 EFCAB3Q8N7B9 438 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SKA2Q8WVK7 121 aaPredicted RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 HIST1H2AHQ96KK5 128 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 HIST1H2AJQ99878 128 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 CCM2Q9BSQ5 444 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 H2AFJQ9BTM1 129 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 TRMT61BQ9BVS5 477 aaKnown RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 PCDHGA7Q9Y5G6 932 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 DOCK9Q9BZ29 2069 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SLC5A10A0PJK1 596 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 TMEM202A6NGA9 273 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 MRASO14807 208 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 INPP4BO15327 924 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 MMP20O60882 483 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 TBX10O75333 385 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 KATNA1O75449 491 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 WDR47O94967 919 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 PTDSS1P48651 473 aaKnown RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 THOP1P52888 689 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 DIO3P55073 304 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SLC34A1Q06495 639 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 CCNIQ14094 377 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 CCDC6Q16204 474 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 ZXDCQ2QGD7 858 aaPredicted RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 ZNF658BQ4V348 819 aaPredicted RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 BCL7AQ4VC05 210 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 ATP6AP1LQ52LC2 224 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 FAM46CQ5VWP2 391 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 C8orf82Q6P1X6 216 aaPredicted RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 IL27RAQ6UWB1 636 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 MCOLN3Q8TDD5 553 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 TSPEARQ8WU66 669 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 RIPOR3Q96MK2 946 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 P2RY13Q9BPV8 354 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 SLC29A3Q9BZD2 475 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 ZCCHC2Q9C0B9 1178 aaKnown RBP14.62□□□□□ -0.07
VCAN-211ENST00000513984 ZDHHC4Q9NPG8 344 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 TMEM45AQ9NWC5 275 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 FADS3Q9Y5Q0 445 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 STON1Q9Y6Q2 735 aa14.62□□□□□ -0.07
VCAN-211ENST00000513984 COL4A2P08572 1712 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 PABPN1LA6NDY0 278 aaKnown RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 LZTS3O60299 673 aaPredicted RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 PSIP1O75475 530 aaKnown RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 EPORP19235 508 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 PSME3P61289 254 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 AP2B1P63010 937 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 DLX2Q07687 328 aaPredicted RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 CNTN1Q12860 1018 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 CEACAM7Q14002 265 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 ABRAXAS2Q15018 415 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms