RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 C1orf61Q13536 156 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TCEA2Q15560 299 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 HLA-BQ31612 363 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 CAPRIN2Q6IMN6 1127 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 SLC30A9Q6PML9 568 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ISCA2Q86U28 154 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 PDZD3Q86UT5 571 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 GKN2Q86XP6 184 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 RASGRP3Q8IV61 690 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 LMX1AQ8TE12 382 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ASB11Q8WXH4 323 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 KIAA1191Q96A73 305 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 WWP1Q9H0M0 922 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TFB2MQ9H5Q4 396 aaKnown RBP12.25□□□□□ -0.45
PDPN-210ENST00000513143 FSCN3Q9NQT6 498 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 PRDM8Q9NQV8 689 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TMEM216Q9P0N5 145 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 TAAR2Q9P1P5 351 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 IKZF3Q9UKT9 509 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 GRID1Q9ULK0 1009 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 PSMD13Q9UNM6 376 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 WDR37Q9Y2I8 494 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
PDPN-210ENST00000513143 ARID1BQ8NFD5 2236 aaPredicted RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 A0A1B0GTQ1 180 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 LMO7DNF2Z398 122 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 H3BQF6 201 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 GFYI3L273 518 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 IFRD1O00458 451 aaPredicted RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 BTN3A1O00481 513 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 SLC16A5O15375 505 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 YKT6O15498 198 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 SNX2O60749 519 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 PSIP1O75475 530 aaKnown RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 EML2O95834 649 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 F3P13726 295 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 TFEBP19484 476 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 MAPK9P45984 424 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 KPNA2P52292 529 aaKnown RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 ABRQ12979 859 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 BNIP3Q12983 259 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 CLCA4Q14CN2 919 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 SEPT7Q16181 437 aaKnown RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 CCDC6Q16204 474 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 TECRLQ5HYJ1 363 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 KLC3Q6P597 504 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 UNC5DQ6UXZ4 953 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 RHEBL1Q8TAI7 183 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 SKA2Q8WVK7 121 aaPredicted RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 TFGQ92734 400 aaPredicted RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 PTERQ96BW5 349 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 RMDN2Q96LZ7 410 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 FOPNLQ96NB1 174 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 GAREM1Q9H706 876 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
PDPN-210ENST00000513143 GMEB2Q9UKD1 530 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 PLLPQ9Y342 182 aa12.24□□□□□ -0.45
PDPN-210ENST00000513143 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 DNAH14Q0VDD8 3507 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 MYO15AQ9UKN7 3530 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 CDC7O00311 574 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 YY2O15391 372 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SDC3O75056 442 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 CER1O95813 267 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 C8GP07360 202 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 RBP1P09455 135 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 ZNF806P0C7X5 589 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 ENGP17813 658 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 EPHA8P29322 1005 aaPredicted RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 RPA3P35244 121 aaPredicted RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 GLRBP48167 497 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 KCNC1P48547 511 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SLC18A1P54219 525 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SP140Q13342 867 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 MPP2Q14168 576 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 OR4D1Q15615 310 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 TSNQ15631 228 aaKnown RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 CCDC153Q494R4 210 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 N4BP2L1Q5TBK1 243 aaPredicted RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 IYDQ6PHW0 289 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SLC25A45Q8N413 288 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 TMEM151AQ8N4L1 468 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 STAG3L4Q8TBR4 150 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 TCP10LQ8TDR4 215 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 DLG3Q92796 817 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms