RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 A0A1W2PRV1 198 aa8.8□□□□□ -1
VCAN-208ENST00000512590 A8MVJ9 347 aa8.8□□□□□ -1
VCAN-208ENST00000512590 RFXANKO14593 260 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TGM5O43548 720 aa8.8□□□□□ -1
VCAN-208ENST00000512590 UGT2B11O75310 529 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ZNF217O75362 1048 aa8.8□□□□□ -1
VCAN-208ENST00000512590 OAZ2O95190 189 aa8.8□□□□□ -1
VCAN-208ENST00000512590 SGCAQ16586 387 aa8.8□□□□□ -1
VCAN-208ENST00000512590 DGUOKQ16854 277 aa8.8□□□□□ -1
VCAN-208ENST00000512590 EMC10Q5UCC4 262 aa8.8□□□□□ -1
VCAN-208ENST00000512590 FAM69BQ5VUD6 431 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ARSKQ6UWY0 536 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PTF1AQ7RTS3 328 aa8.8□□□□□ -1
VCAN-208ENST00000512590 MON1AQ86VX9 555 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ZDHHC13Q8IUH4 622 aa8.8□□□□□ -1
VCAN-208ENST00000512590 AADATQ8N5Z0 425 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TBCBQ99426 244 aa8.8□□□□□ -1
VCAN-208ENST00000512590 FBXO6Q9NRD1 293 aaPredicted RBP8.8□□□□□ -1
VCAN-208ENST00000512590 DECR2Q9NUI1 292 aa8.8□□□□□ -1
VCAN-208ENST00000512590 HPF1Q9NWY4 346 aa8.8□□□□□ -1
VCAN-208ENST00000512590 SSR3Q9UNL2 185 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PSAT1Q9Y617 370 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ATP7BP35670 1465 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
VCAN-208ENST00000512590 LOC105369274A0A096LPK9 316 aa8.79□□□□□ -1
VCAN-208ENST00000512590 KCNK1O00180 336 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PPEF2O14830 753 aa8.79□□□□□ -1
VCAN-208ENST00000512590 RIPK2O43353 540 aa8.79□□□□□ -1
VCAN-208ENST00000512590 SUV39H1O43463 412 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PLOD3O60568 738 aa8.79□□□□□ -1
VCAN-208ENST00000512590 NCK1P16333 377 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CARD17Q5XLA6 110 aa8.79□□□□□ -1
VCAN-208ENST00000512590 TXNDC11Q6PKC3 985 aa8.79□□□□□ -1
VCAN-208ENST00000512590 YTHDF3Q7Z739 585 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 OR4N4Q8N0Y3 316 aa8.79□□□□□ -1
VCAN-208ENST00000512590 LRRC17Q8N6Y2 441 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ZNF283Q8N7M2 679 aa8.79□□□□□ -1
VCAN-208ENST00000512590 GRHL3Q8TE85 626 aa8.79□□□□□ -1
VCAN-208ENST00000512590 MIEF2Q96C03 454 aa8.79□□□□□ -1
VCAN-208ENST00000512590 TGM7Q96PF1 710 aa8.79□□□□□ -1
VCAN-208ENST00000512590 SCGB3A2Q96PL1 93 aa8.79□□□□□ -1
VCAN-208ENST00000512590 C14orf166Q9Y224 244 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 MRASO14807 208 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ATE1O95260 518 aa8.79□□□□□ -1
VCAN-208ENST00000512590 WDPCPO95876 746 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ALDOBP05062 364 aa8.79□□□□□ -1
VCAN-208ENST00000512590 SLC2A1P11166 492 aa8.79□□□□□ -1
VCAN-208ENST00000512590 GADD45AP24522 165 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CAPGP40121 348 aa8.79□□□□□ -1
VCAN-208ENST00000512590 GRM5P41594 1212 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ARCN1P48444 511 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 ANTXR2P58335 489 aa8.79□□□□□ -1
VCAN-208ENST00000512590 UBAP2Q5T6F2 1119 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 SPRYD7Q5W111 196 aa8.79□□□□□ -1
VCAN-208ENST00000512590 C11orf63Q6NUN7 778 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CES3Q6UWW8 571 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ZSWIM2Q8NEG5 633 aa8.79□□□□□ -1
VCAN-208ENST00000512590 THAP3Q8WTV1 239 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 IFT27Q9BW83 186 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ADAP2Q9NPF8 381 aa8.79□□□□□ -1
VCAN-208ENST00000512590 EIF2B3Q9NR50 452 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 ABCB8Q9NUT2 735 aa8.79□□□□□ -1
VCAN-208ENST00000512590 HES2Q9Y543 173 aa8.79□□□□□ -1
VCAN-208ENST00000512590 MAGI2Q86UL8 1455 aa8.79□□□□□ -1
VCAN-208ENST00000512590 A0A1B0GVI7 797 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PLOD2O00469 737 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PIP5K1BO14986 540 aa8.79□□□□□ -1
VCAN-208ENST00000512590 NPHS1O60500 1241 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CBFA2T3O75081 653 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PDE5AO76074 875 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ACADSP16219 412 aa8.79□□□□□ -1
VCAN-208ENST00000512590 APLNRP35414 380 aa8.79□□□□□ -1
VCAN-208ENST00000512590 MAGEA9P43362 315 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PLA2G16P53816 162 aa8.79□□□□□ -1
VCAN-208ENST00000512590 FAM214AQ32MH5 1076 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CDONQ4KMG0 1287 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PLEKHA7Q6IQ23 1121 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CATSPERGQ6ZRH7 1159 aa8.79□□□□□ -1
VCAN-208ENST00000512590 GPRIN3Q6ZVF9 776 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ZNF184Q99676 751 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 IER2Q9BTL4 223 aa8.79□□□□□ -1
VCAN-208ENST00000512590 METTL8Q9H825 291 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 POLLQ9UGP5 575 aa8.79□□□□□ -1
VCAN-208ENST00000512590 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 DUSP11O75319 330 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 NR2F6P10588 404 aa8.79□□□□□ -1
VCAN-208ENST00000512590 CCNB1P14635 433 aa8.79□□□□□ -1
VCAN-208ENST00000512590 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
VCAN-208ENST00000512590 CDKL4Q5MAI5 379 aa8.79□□□□□ -1
VCAN-208ENST00000512590 NIPAL1Q6NVV3 410 aa8.79□□□□□ -1
VCAN-208ENST00000512590 NEPROQ6NW34 567 aa8.79□□□□□ -1
VCAN-208ENST00000512590 HACD2Q6Y1H2 254 aa8.79□□□□□ -1
VCAN-208ENST00000512590 ZNF571Q7Z3V5 609 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 DNAJB7Q7Z6W7 309 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 KATNAL2Q8IYT4 538 aa8.79□□□□□ -1
VCAN-208ENST00000512590 PTGR2Q8N8N7 351 aaPredicted RBP8.79□□□□□ -1
VCAN-208ENST00000512590 OR6K6Q8NGW6 343 aa8.79□□□□□ -1
VCAN-208ENST00000512590 SFXN1Q9H9B4 322 aa8.79□□□□□ -1
VCAN-208ENST00000512590 Q9N2J8 555 aa8.79□□□□□ -1
VCAN-208ENST00000512590 TAS2R1Q9NYW7 299 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms